Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC24.14■■□□□ 1.46
SLC52A1Q9NWF4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
SLC52A1Q9NWF4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC24.14■■□□□ 1.46
SLC52A1Q9NWF4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SLC52A1Q9NWF4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC24.14■■□□□ 1.46
SLC52A1Q9NWF4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 AL353705.2-201ENST00000428243 662 ntBASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 API5-211ENST00000534695 560 ntTSL 5 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.45
SLC52A1Q9NWF4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 AL353779.1-201ENST00000434793 351 ntBASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 U91328.1-201ENST00000437528 223 ntBASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 ZNF890P-202ENST00000530367 1156 ntBASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 AC116353.5-201ENST00000638148 1699 ntBASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 AC004408.2-201ENST00000623613 2777 ntBASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC24.13■■□□□ 1.45
SLC52A1Q9NWF4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 RPL37AP1-201ENST00000412502 279 ntBASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 ARSEP1-201ENST00000420443 635 ntBASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 AL354751.1-201ENST00000412768 1863 ntBASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 CETN4P-206ENST00000642099 2168 ntBASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC24.12■■□□□ 1.45
SLC52A1Q9NWF4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
SLC52A1Q9NWF4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC24.11■■□□□ 1.45
SLC52A1Q9NWF4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC24.11■■□□□ 1.45
SLC52A1Q9NWF4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC24.11■■□□□ 1.45
SLC52A1Q9NWF4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC24.11■■□□□ 1.45
SLC52A1Q9NWF4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SLC52A1Q9NWF4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SLC52A1Q9NWF4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SLC52A1Q9NWF4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SLC52A1Q9NWF4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SLC52A1Q9NWF4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SLC52A1Q9NWF4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SLC52A1Q9NWF4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms