Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 AP000523.1-201ENST00000398242 1049 ntBASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 AC140113.3-201ENST00000605663 199 ntBASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 TMEM191A-211ENST00000637163 1067 ntBASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 AL603756.1-201ENST00000606511 2163 ntBASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 AC093525.9-201ENST00000624961 1746 ntBASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L1Q9NU39 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 MTCYBP15-201ENST00000433123 1127 ntBASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 MTND1P26-201ENST00000440488 538 ntBASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 AP006294.2-201ENST00000641667 209 ntBASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 KRT89P-201ENST00000620027 1478 ntBASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD4L1Q9NU39 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXD4L1Q9NU39 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXD4L1Q9NU39 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms