Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.85■□□□□ 0.77
SH2D4AQ9H788 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.85■□□□□ 0.77
SH2D4AQ9H788 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.85■□□□□ 0.77
SH2D4AQ9H788 GNAS-203ENST00000306120 1878 ntBASIC19.85■□□□□ 0.77
SH2D4AQ9H788 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.85■□□□□ 0.77
SH2D4AQ9H788 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH2D4AQ9H788 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SH2D4AQ9H788 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH2D4AQ9H788 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 TSEN15P1-201ENST00000423257 515 ntBASIC19.84■□□□□ 0.77
SH2D4AQ9H788 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SH2D4AQ9H788 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SH2D4AQ9H788 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
SH2D4AQ9H788 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.83■□□□□ 0.77
SH2D4AQ9H788 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SH2D4AQ9H788 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SH2D4AQ9H788 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SH2D4AQ9H788 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SH2D4AQ9H788 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SH2D4AQ9H788 AC004461.1-201ENST00000412461 403 ntBASIC19.83■□□□□ 0.77
SH2D4AQ9H788 AL355306.1-201ENST00000415580 579 ntBASIC19.83■□□□□ 0.77
SH2D4AQ9H788 AL645939.2-201ENST00000427340 991 ntBASIC19.83■□□□□ 0.77
SH2D4AQ9H788 ADH5P3-201ENST00000433842 1137 ntBASIC19.83■□□□□ 0.77
SH2D4AQ9H788 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.83■□□□□ 0.77
SH2D4AQ9H788 RFPL4AP1-201ENST00000530883 850 ntBASIC19.83■□□□□ 0.77
SH2D4AQ9H788 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SH2D4AQ9H788 AC022145.2-201ENST00000598203 171 ntBASIC19.83■□□□□ 0.77
SH2D4AQ9H788 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.83■□□□□ 0.77
SH2D4AQ9H788 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SH2D4AQ9H788 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
SH2D4AQ9H788 AL353732.1-201ENST00000569618 1459 ntBASIC19.83■□□□□ 0.76
SH2D4AQ9H788 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SH2D4AQ9H788 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SH2D4AQ9H788 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SH2D4AQ9H788 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SH2D4AQ9H788 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SH2D4AQ9H788 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SH2D4AQ9H788 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SH2D4AQ9H788 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SH2D4AQ9H788 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.83■□□□□ 0.76
SH2D4AQ9H788 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SH2D4AQ9H788 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SH2D4AQ9H788 AL138688.1-201ENST00000624851 1594 ntBASIC19.83■□□□□ 0.76
SH2D4AQ9H788 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 HMGN1P19-201ENST00000436976 333 ntBASIC19.82■□□□□ 0.76
SH2D4AQ9H788 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 RN7SL589P-201ENST00000481268 310 ntBASIC19.82■□□□□ 0.76
SH2D4AQ9H788 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 AC026120.1-201ENST00000611536 926 ntBASIC19.82■□□□□ 0.76
SH2D4AQ9H788 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms