Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 AC148477.8-201ENST00000624298 468 ntBASIC15.26■□□□□ 0.03
NELFAQ9H3P2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 AL022326.1-202ENST00000641533 845 ntBASIC15.26■□□□□ 0.03
NELFAQ9H3P2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 AC124067.4-201ENST00000519691 2379 ntBASIC15.26■□□□□ 0.03
NELFAQ9H3P2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 AL121761.2-201ENST00000598007 1648 ntBASIC15.25■□□□□ 0.03
NELFAQ9H3P2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 KRT18P67-201ENST00000432816 1264 ntBASIC15.25■□□□□ 0.03
NELFAQ9H3P2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 AC080080.1-201ENST00000625121 2420 ntBASIC15.25■□□□□ 0.03
NELFAQ9H3P2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NELFAQ9H3P2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 EGFEM1P-202ENST00000431685 1563 ntBASIC15.24■□□□□ 0.03
NELFAQ9H3P2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 HNRNPDP1-201ENST00000439535 754 ntBASIC15.24■□□□□ 0.03
NELFAQ9H3P2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 MTDHP4-201ENST00000600287 670 ntBASIC15.24■□□□□ 0.03
NELFAQ9H3P2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.24■□□□□ 0.03
NELFAQ9H3P2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms