Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC007967.4-201ENST00000614700 386 ntBASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 COX5BP8-201ENST00000416911 349 ntBASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 AP001350.2-201ENST00000625104 1094 ntBASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 AC022144.1-201ENST00000602255 1580 ntBASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTFDC1Q9BY42 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 SPTLC1P1-201ENST00000447199 261 ntBASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 AC105233.2-201ENST00000523697 349 ntBASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 AF228730.5-201ENST00000530288 346 ntBASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 SPDYE12P-201ENST00000618416 771 ntBASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 AC131009.4-201ENST00000624048 1740 ntBASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.53■□□□□ 0.88
RTFDC1Q9BY42 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 AP3S2-216ENST00000617003 1561 ntBASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 AL138828.2-201ENST00000615812 383 ntBASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms