Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF2Q99805 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF2Q99805 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TM9SF2Q99805 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.91■□□□□ 0.14
TM9SF2Q99805 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF2Q99805 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.91■□□□□ 0.14
TM9SF2Q99805 LINC00304-203ENST00000565008 1864 ntBASIC15.91■□□□□ 0.14
TM9SF2Q99805 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 AF186996.4-201ENST00000467186 377 ntBASIC15.9■□□□□ 0.14
TM9SF2Q99805 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 AL355877.3-201ENST00000622820 899 ntBASIC15.9■□□□□ 0.14
TM9SF2Q99805 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.9■□□□□ 0.14
TM9SF2Q99805 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF2Q99805 NFIC-211ENST00000641145 8399 ntBASIC15.9■□□□□ 0.14
TM9SF2Q99805 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 FAM220CP-201ENST00000395253 831 ntBASIC15.89■□□□□ 0.13
TM9SF2Q99805 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.89■□□□□ 0.13
TM9SF2Q99805 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 FAM197Y8-203ENST00000450145 560 ntBASIC15.89■□□□□ 0.13
TM9SF2Q99805 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 SLC25A6P4-201ENST00000586535 553 ntBASIC15.89■□□□□ 0.13
TM9SF2Q99805 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF2Q99805 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF2Q99805 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms