Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.24■□□□□ 0.51
YME1L1Q96TA2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 AC008267.7-201ENST00000624570 1194 ntBASIC18.24■□□□□ 0.51
YME1L1Q96TA2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YME1L1Q96TA2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 LYSMD4-203ENST00000378904 2122 ntBASIC18.23■□□□□ 0.51
YME1L1Q96TA2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 AC020916.1-201ENST00000587762 1774 ntBASIC18.23■□□□□ 0.51
YME1L1Q96TA2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 HCG4-201ENST00000418983 998 ntBASIC18.23■□□□□ 0.51
YME1L1Q96TA2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YME1L1Q96TA2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.22■□□□□ 0.51
YME1L1Q96TA2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 AP000842.3-202ENST00000569238 1080 ntBASIC18.22■□□□□ 0.51
YME1L1Q96TA2 AC027307.2-201ENST00000591252 911 ntBASIC18.22■□□□□ 0.51
YME1L1Q96TA2 AC027307.3-201ENST00000594262 1100 ntBASIC18.22■□□□□ 0.51
YME1L1Q96TA2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
YME1L1Q96TA2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 CRB3P1-201ENST00000449338 276 ntBASIC18.21■□□□□ 0.51
YME1L1Q96TA2 HLA-J-202ENST00000469281 1241 ntBASIC18.21■□□□□ 0.51
YME1L1Q96TA2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 AL031055.1-201ENST00000606362 631 ntBASIC18.21■□□□□ 0.51
YME1L1Q96TA2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.21■□□□□ 0.51
YME1L1Q96TA2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms