Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPENQ96T58 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPENQ96T58 CROCCP2-202ENST00000412962 2773 ntBASIC15.21■□□□□ 0.03
SPENQ96T58 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.21■□□□□ 0.03
SPENQ96T58 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPENQ96T58 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.21■□□□□ 0.03
SPENQ96T58 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.21■□□□□ 0.02
SPENQ96T58 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.21■□□□□ 0.02
SPENQ96T58 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPENQ96T58 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
SPENQ96T58 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
SPENQ96T58 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.21■□□□□ 0.02
SPENQ96T58 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.02
SPENQ96T58 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.21■□□□□ 0.02
SPENQ96T58 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.21■□□□□ 0.02
SPENQ96T58 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.21■□□□□ 0.02
SPENQ96T58 TP53TG3HP-202ENST00000569755 579 ntBASIC15.21■□□□□ 0.02
SPENQ96T58 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.21■□□□□ 0.02
SPENQ96T58 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.21■□□□□ 0.02
SPENQ96T58 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPENQ96T58 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.21■□□□□ 0.02
SPENQ96T58 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
SPENQ96T58 AC012569.1-201ENST00000591191 1524 ntBASIC15.21■□□□□ 0.02
SPENQ96T58 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.2■□□□□ 0.02
SPENQ96T58 KRT17P8-201ENST00000540749 863 ntBASIC15.2■□□□□ 0.02
SPENQ96T58 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.2■□□□□ 0.02
SPENQ96T58 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.2■□□□□ 0.02
SPENQ96T58 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SPENQ96T58 AL358472.5-202ENST00000641448 1267 ntBASIC15.2■□□□□ 0.02
SPENQ96T58 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.2■□□□□ 0.02
SPENQ96T58 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SPENQ96T58 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.2■□□□□ 0.02
SPENQ96T58 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.2■□□□□ 0.02
SPENQ96T58 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.2■□□□□ 0.02
SPENQ96T58 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.2■□□□□ 0.02
SPENQ96T58 TEX28P1-201ENST00000613479 1221 ntBASIC15.2■□□□□ 0.02
SPENQ96T58 TEX28P2-201ENST00000617764 1221 ntBASIC15.2■□□□□ 0.02
SPENQ96T58 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SPENQ96T58 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
SPENQ96T58 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.2■□□□□ 0.02
SPENQ96T58 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SPENQ96T58 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.2■□□□□ 0.02
SPENQ96T58 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.2■□□□□ 0.02
SPENQ96T58 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPENQ96T58 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.19■□□□□ 0.02
SPENQ96T58 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.19■□□□□ 0.02
SPENQ96T58 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SPENQ96T58 AL031055.1-201ENST00000606362 631 ntBASIC15.19■□□□□ 0.02
SPENQ96T58 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.19■□□□□ 0.02
SPENQ96T58 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.19■□□□□ 0.02
SPENQ96T58 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 AC092068.3-201ENST00000587894 2016 ntBASIC15.19■□□□□ 0.02
SPENQ96T58 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 AC090164.3-201ENST00000610780 2143 ntBASIC15.19■□□□□ 0.02
SPENQ96T58 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.19■□□□□ 0.02
SPENQ96T58 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SPENQ96T58 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.19■□□□□ 0.02
SPENQ96T58 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.19■□□□□ 0.02
SPENQ96T58 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPENQ96T58 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.19■□□□□ 0.02
SPENQ96T58 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.19■□□□□ 0.02
SPENQ96T58 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.19■□□□□ 0.02
SPENQ96T58 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.18■□□□□ 0.02
SPENQ96T58 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.18■□□□□ 0.02
SPENQ96T58 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms