Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEK1Q96PY6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEK1Q96PY6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEK1Q96PY6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEK1Q96PY6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEK1Q96PY6 AC079781.3-201ENST00000449110 356 ntBASIC20.2■□□□□ 0.82
NEK1Q96PY6 PAWRP1-201ENST00000451083 565 ntBASIC20.2■□□□□ 0.82
NEK1Q96PY6 OR7E14P-202ENST00000530490 1290 ntBASIC20.2■□□□□ 0.82
NEK1Q96PY6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NEK1Q96PY6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEK1Q96PY6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NEK1Q96PY6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEK1Q96PY6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEK1Q96PY6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEK1Q96PY6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.2■□□□□ 0.82
NEK1Q96PY6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEK1Q96PY6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 ELK2BP-201ENST00000415014 1224 ntBASIC20.19■□□□□ 0.82
NEK1Q96PY6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 AC006557.2-201ENST00000592985 1240 ntBASIC20.19■□□□□ 0.82
NEK1Q96PY6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NEK1Q96PY6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.19■□□□□ 0.82
NEK1Q96PY6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 HNRNPDP1-201ENST00000439535 754 ntBASIC20.18■□□□□ 0.82
NEK1Q96PY6 AC018712.1-201ENST00000455767 687 ntBASIC20.18■□□□□ 0.82
NEK1Q96PY6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 AL645728.1-201ENST00000366221 2101 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms