Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 AL355306.1-201ENST00000415580 579 ntBASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 AC140658.5-201ENST00000438532 169 ntBASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 MIR4515-201ENST00000584082 81 ntBASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 AL121761.2-201ENST00000598007 1648 ntBASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 AC002056.1-201ENST00000395613 760 ntBASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 AL645728.2-201ENST00000641974 660 ntBASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC85AQ96PX6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 LINC02084-201ENST00000606069 1096 ntBASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 AC026120.1-201ENST00000611536 926 ntBASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC85AQ96PX6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 PP12613-201ENST00000424958 2230 ntBASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC85AQ96PX6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 CROCCP2-202ENST00000412962 2773 ntBASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms