Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIFAQ96CG3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIFAQ96CG3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.11■□□□□ 0.49
TIFAQ96CG3 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.11■□□□□ 0.49
TIFAQ96CG3 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.11■□□□□ 0.49
TIFAQ96CG3 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.11■□□□□ 0.49
TIFAQ96CG3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIFAQ96CG3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIFAQ96CG3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TIFAQ96CG3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIFAQ96CG3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIFAQ96CG3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIFAQ96CG3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIFAQ96CG3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIFAQ96CG3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TIFAQ96CG3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.1■□□□□ 0.49
TIFAQ96CG3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TIFAQ96CG3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TIFAQ96CG3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TIFAQ96CG3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.1■□□□□ 0.49
TIFAQ96CG3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.1■□□□□ 0.49
TIFAQ96CG3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.1■□□□□ 0.49
TIFAQ96CG3 DFFBP1-201ENST00000433250 979 ntBASIC18.1■□□□□ 0.49
TIFAQ96CG3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.1■□□□□ 0.49
TIFAQ96CG3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.1■□□□□ 0.49
TIFAQ96CG3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.1■□□□□ 0.49
TIFAQ96CG3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 AL031055.1-201ENST00000606362 631 ntBASIC18.1■□□□□ 0.49
TIFAQ96CG3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.1■□□□□ 0.49
TIFAQ96CG3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.1■□□□□ 0.49
TIFAQ96CG3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.1■□□□□ 0.49
TIFAQ96CG3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIFAQ96CG3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TIFAQ96CG3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.09■□□□□ 0.49
TIFAQ96CG3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.09■□□□□ 0.49
TIFAQ96CG3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TIFAQ96CG3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.09■□□□□ 0.49
TIFAQ96CG3 AC087499.5-201ENST00000452760 1342 ntBASIC18.09■□□□□ 0.49
TIFAQ96CG3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.09■□□□□ 0.49
TIFAQ96CG3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.09■□□□□ 0.49
TIFAQ96CG3 AC087499.6-201ENST00000411576 835 ntBASIC18.09■□□□□ 0.49
TIFAQ96CG3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.09■□□□□ 0.49
TIFAQ96CG3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
TIFAQ96CG3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TIFAQ96CG3 AL033527.4-201ENST00000641026 673 ntBASIC18.09■□□□□ 0.49
TIFAQ96CG3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.09■□□□□ 0.49
TIFAQ96CG3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIFAQ96CG3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.09■□□□□ 0.49
TIFAQ96CG3 AC016027.1-202ENST00000607927 1699 ntBASIC18.09■□□□□ 0.49
TIFAQ96CG3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
TIFAQ96CG3 AP3S2-216ENST00000617003 1561 ntBASIC18.08■□□□□ 0.49
TIFAQ96CG3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms