Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN23Q96B33 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN23Q96B33 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN23Q96B33 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.86■□□□□ 0.29
CLDN23Q96B33 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN23Q96B33 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN23Q96B33 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN23Q96B33 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN23Q96B33 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 AC106886.1-201ENST00000568660 600 ntBASIC16.86■□□□□ 0.29
CLDN23Q96B33 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 AL589739.1-201ENST00000607720 493 ntBASIC16.86■□□□□ 0.29
CLDN23Q96B33 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN23Q96B33 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN23Q96B33 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN23Q96B33 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN23Q96B33 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
CLDN23Q96B33 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN23Q96B33 BTBD7P1-201ENST00000447253 1453 ntBASIC16.86■□□□□ 0.29
CLDN23Q96B33 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN23Q96B33 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 FAM220BP-201ENST00000377689 816 ntBASIC16.85■□□□□ 0.29
CLDN23Q96B33 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 AC079776.1-201ENST00000401540 1152 ntBASIC16.85■□□□□ 0.29
CLDN23Q96B33 AC087499.6-201ENST00000411576 835 ntBASIC16.85■□□□□ 0.29
CLDN23Q96B33 RPS2P32-201ENST00000439199 892 ntBASIC16.85■□□□□ 0.29
CLDN23Q96B33 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 CYP2A7P1-201ENST00000595391 815 ntBASIC16.85■□□□□ 0.29
CLDN23Q96B33 RN7SL828P-201ENST00000607615 303 ntBASIC16.85■□□□□ 0.29
CLDN23Q96B33 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 AC120498.9-201ENST00000339021 3867 ntBASIC16.85■□□□□ 0.29
CLDN23Q96B33 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN23Q96B33 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 EGFEM1P-202ENST00000431685 1563 ntBASIC16.85■□□□□ 0.29
CLDN23Q96B33 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN23Q96B33 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN23Q96B33 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN23Q96B33 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN23Q96B33 LINC00896-202ENST00000609602 2128 ntBASIC16.84■□□□□ 0.29
CLDN23Q96B33 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN23Q96B33 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 AL512384.1-201ENST00000406683 331 ntBASIC16.84■□□□□ 0.29
CLDN23Q96B33 AP006294.1-201ENST00000415407 339 ntBASIC16.84■□□□□ 0.29
CLDN23Q96B33 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.84■□□□□ 0.29
CLDN23Q96B33 ACA64.2-201ENST00000459014 129 ntBASIC16.84■□□□□ 0.29
CLDN23Q96B33 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN23Q96B33 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 MIR4492-201ENST00000581627 80 ntBASIC16.84■□□□□ 0.29
CLDN23Q96B33 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN23Q96B33 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms