Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPGRQ92834 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPGRQ92834 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPGRQ92834 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RPGRQ92834 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RPGRQ92834 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPGRQ92834 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RPGRQ92834 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.89■□□□□ 0.93
RPGRQ92834 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RPGRQ92834 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRQ92834 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.89■□□□□ 0.93
RPGRQ92834 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RPGRQ92834 AC092580.3-201ENST00000430932 139 ntBASIC20.89■□□□□ 0.93
RPGRQ92834 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRQ92834 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.89■□□□□ 0.93
RPGRQ92834 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.89■□□□□ 0.93
RPGRQ92834 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RPGRQ92834 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RPGRQ92834 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.89■□□□□ 0.93
RPGRQ92834 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRQ92834 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRQ92834 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRQ92834 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRQ92834 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.88■□□□□ 0.93
RPGRQ92834 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RPGRQ92834 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
RPGRQ92834 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RPGRQ92834 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.88■□□□□ 0.93
RPGRQ92834 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRQ92834 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRQ92834 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRQ92834 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRQ92834 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRQ92834 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.88■□□□□ 0.93
RPGRQ92834 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.88■□□□□ 0.93
RPGRQ92834 AC241585.1-201ENST00000433527 519 ntBASIC20.88■□□□□ 0.93
RPGRQ92834 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRQ92834 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.88■□□□□ 0.93
RPGRQ92834 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.88■□□□□ 0.93
RPGRQ92834 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.88■□□□□ 0.93
RPGRQ92834 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RPGRQ92834 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.88■□□□□ 0.93
RPGRQ92834 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRQ92834 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.88■□□□□ 0.93
RPGRQ92834 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
RPGRQ92834 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.88■□□□□ 0.93
RPGRQ92834 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRQ92834 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.88■□□□□ 0.93
RPGRQ92834 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRQ92834 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRQ92834 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.87■□□□□ 0.93
RPGRQ92834 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
RPGRQ92834 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRQ92834 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRQ92834 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RPGRQ92834 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.87■□□□□ 0.93
RPGRQ92834 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.87■□□□□ 0.93
RPGRQ92834 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.87■□□□□ 0.93
RPGRQ92834 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.87■□□□□ 0.93
RPGRQ92834 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RPGRQ92834 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RPGRQ92834 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRQ92834 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RPGRQ92834 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRQ92834 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRQ92834 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPGRQ92834 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.87■□□□□ 0.93
RPGRQ92834 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.86■□□□□ 0.93
RPGRQ92834 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.86■□□□□ 0.93
RPGRQ92834 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.86■□□□□ 0.93
RPGRQ92834 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.86■□□□□ 0.93
RPGRQ92834 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.86■□□□□ 0.93
RPGRQ92834 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.86■□□□□ 0.93
RPGRQ92834 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.86■□□□□ 0.93
RPGRQ92834 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.86■□□□□ 0.93
RPGRQ92834 AL138918.1-201ENST00000568306 659 ntBASIC20.86■□□□□ 0.93
RPGRQ92834 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
RPGRQ92834 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.86■□□□□ 0.93
RPGRQ92834 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.86■□□□□ 0.93
RPGRQ92834 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.86■□□□□ 0.93
RPGRQ92834 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RPGRQ92834 AC131009.4-201ENST00000624048 1740 ntBASIC20.86■□□□□ 0.93
RPGRQ92834 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.86■□□□□ 0.93
RPGRQ92834 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPGRQ92834 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms