Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SHC3Q92529 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.19■□□□□ 0.5
SHC3Q92529 AC087163.2-201ENST00000457299 853 ntBASIC18.19■□□□□ 0.5
SHC3Q92529 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SHC3Q92529 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.19■□□□□ 0.5
SHC3Q92529 OR7E14P-202ENST00000530490 1290 ntBASIC18.19■□□□□ 0.5
SHC3Q92529 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.19■□□□□ 0.5
SHC3Q92529 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.19■□□□□ 0.5
SHC3Q92529 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.19■□□□□ 0.5
SHC3Q92529 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.19■□□□□ 0.5
SHC3Q92529 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.19■□□□□ 0.5
SHC3Q92529 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
SHC3Q92529 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.19■□□□□ 0.5
SHC3Q92529 OR6D1P-202ENST00000641007 5290 ntBASIC18.19■□□□□ 0.5
SHC3Q92529 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SHC3Q92529 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC3Q92529 AL118508.1-201ENST00000613502 2345 ntBASIC18.18■□□□□ 0.5
SHC3Q92529 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC3Q92529 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC3Q92529 AL603756.1-201ENST00000606511 2163 ntBASIC18.18■□□□□ 0.5
SHC3Q92529 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHC3Q92529 AC002310.6-201ENST00000624451 1377 ntBASIC18.18■□□□□ 0.5
SHC3Q92529 AC092171.3-201ENST00000610122 2651 ntBASIC18.18■□□□□ 0.5
SHC3Q92529 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC3Q92529 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC3Q92529 AL391256.1-201ENST00000443260 1855 ntBASIC18.18■□□□□ 0.5
SHC3Q92529 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC3Q92529 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SHC3Q92529 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.18■□□□□ 0.5
SHC3Q92529 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC3Q92529 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC3Q92529 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
SHC3Q92529 HNRNPDP1-201ENST00000439535 754 ntBASIC18.18■□□□□ 0.5
SHC3Q92529 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC3Q92529 AC079781.3-201ENST00000449110 356 ntBASIC18.18■□□□□ 0.5
SHC3Q92529 FAM197Y8-203ENST00000450145 560 ntBASIC18.18■□□□□ 0.5
SHC3Q92529 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC3Q92529 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.18■□□□□ 0.5
SHC3Q92529 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.18■□□□□ 0.5
SHC3Q92529 RN7SL510P-201ENST00000581311 263 ntBASIC18.18■□□□□ 0.5
SHC3Q92529 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC3Q92529 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHC3Q92529 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC3Q92529 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SHC3Q92529 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SHC3Q92529 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SHC3Q92529 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SHC3Q92529 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC3Q92529 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC3Q92529 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.17■□□□□ 0.5
SHC3Q92529 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.17■□□□□ 0.5
SHC3Q92529 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 AC124067.4-201ENST00000519691 2379 ntBASIC18.17■□□□□ 0.5
SHC3Q92529 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SHC3Q92529 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 AL450487.1-201ENST00000426799 995 ntBASIC18.17■□□□□ 0.5
SHC3Q92529 KRT18P67-201ENST00000432816 1264 ntBASIC18.17■□□□□ 0.5
SHC3Q92529 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.17■□□□□ 0.5
SHC3Q92529 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.17■□□□□ 0.5
SHC3Q92529 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SHC3Q92529 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.17■□□□□ 0.5
SHC3Q92529 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.17■□□□□ 0.5
SHC3Q92529 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.17■□□□□ 0.5
SHC3Q92529 REXO1L3P-201ENST00000622202 1288 ntBASIC18.17■□□□□ 0.5
SHC3Q92529 AC008735.5-201ENST00000623544 497 ntBASIC18.17■□□□□ 0.5
SHC3Q92529 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.17■□□□□ 0.5
SHC3Q92529 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SHC3Q92529 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SHC3Q92529 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 PI4KAP1-204ENST00000612579 1703 ntBASIC18.17■□□□□ 0.5
SHC3Q92529 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.17■□□□□ 0.5
SHC3Q92529 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC3Q92529 TOP3BP1-201ENST00000420768 1380 ntBASIC18.17■□□□□ 0.5
SHC3Q92529 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
SHC3Q92529 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC3Q92529 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.16■□□□□ 0.5
SHC3Q92529 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.16■□□□□ 0.5
SHC3Q92529 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC3Q92529 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms