Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ALMS1Q8TCU4 KRT8P44-201ENST00000441609 1350 ntBASIC11.32□□□□□ -0.6
ALMS1Q8TCU4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC11.32□□□□□ -0.6
ALMS1Q8TCU4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 AC007389.4-201ENST00000454674 793 ntBASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 AL583810.1-201ENST00000553344 1045 ntBASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 SLC25A1P3-201ENST00000395415 828 ntBASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 CD74-212ENST00000524315 584 ntTSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
ALMS1Q8TCU4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 NOC2LP1-202ENST00000452600 2235 ntBASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 AC114501.2-201ENST00000439631 535 ntBASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 AC093525.8-201ENST00000624099 1342 ntBASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 MIR8072-201ENST00000614241 80 ntBASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ALMS1Q8TCU4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms