Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 AC097637.2-201ENST00000624096 1997 ntBASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 LINC00982-205ENST00000420957 435 ntBASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 LAGE3P1-201ENST00000425356 484 ntBASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 AC139887.3-201ENST00000568585 713 ntBASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SMARCC2Q8TAQ2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 AC243591.1-201ENST00000452967 1364 ntBASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 AL022342.1-201ENST00000400363 863 ntBASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 BX640515.1-201ENST00000617215 977 ntBASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 AC008735.5-201ENST00000623544 497 ntBASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 IL9RP2-201ENST00000423948 1312 ntBASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
SMARCC2Q8TAQ2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SMARCC2Q8TAQ2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SMARCC2Q8TAQ2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.97■□□□□ 0.79
SMARCC2Q8TAQ2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SMARCC2Q8TAQ2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCC2Q8TAQ2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.97■□□□□ 0.79
SMARCC2Q8TAQ2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCC2Q8TAQ2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms