Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 AC124947.2-201ENST00000547118 1133 ntBASIC18.32■□□□□ 0.52
BEST2Q8NFU1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 PCDHB18P-201ENST00000524813 2368 ntBASIC18.32■□□□□ 0.52
BEST2Q8NFU1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 PDPK2P-202ENST00000562415 1191 ntBASIC18.31■□□□□ 0.52
BEST2Q8NFU1 MIR3687-2-201ENST00000577708 61 ntBASIC18.31■□□□□ 0.52
BEST2Q8NFU1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 MIR3687-1-201ENST00000614492 61 ntBASIC18.31■□□□□ 0.52
BEST2Q8NFU1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST2Q8NFU1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 AL021920.2-201ENST00000624828 1351 ntBASIC18.3■□□□□ 0.52
BEST2Q8NFU1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 AC092183.1-201ENST00000469884 875 ntBASIC18.3■□□□□ 0.52
BEST2Q8NFU1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 AC005412.3-201ENST00000580309 715 ntBASIC18.3■□□□□ 0.52
BEST2Q8NFU1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST2Q8NFU1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms