Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL9Q8NET4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
RTL9Q8NET4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.89■□□□□ 0.93
RTL9Q8NET4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RTL9Q8NET4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RTL9Q8NET4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL9Q8NET4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL9Q8NET4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL9Q8NET4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.89■□□□□ 0.93
RTL9Q8NET4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL9Q8NET4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL9Q8NET4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 KRT18P32-201ENST00000424695 1287 ntBASIC20.88■□□□□ 0.93
RTL9Q8NET4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL9Q8NET4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL9Q8NET4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL9Q8NET4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL9Q8NET4 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 AC138761.1-201ENST00000584393 385 ntBASIC20.88■□□□□ 0.93
RTL9Q8NET4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL9Q8NET4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL9Q8NET4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL9Q8NET4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RTL9Q8NET4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL9Q8NET4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL9Q8NET4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL9Q8NET4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTL9Q8NET4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTL9Q8NET4 AC005237.2-201ENST00000434368 219 ntBASIC20.87■□□□□ 0.93
RTL9Q8NET4 FAM86GP-201ENST00000448322 971 ntBASIC20.87■□□□□ 0.93
RTL9Q8NET4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTL9Q8NET4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 DUX4L27-201ENST00000554796 1261 ntBASIC20.87■□□□□ 0.93
RTL9Q8NET4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 MIR4745-201ENST00000577608 62 ntBASIC20.87■□□□□ 0.93
RTL9Q8NET4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 Z92544.3-201ENST00000624747 417 ntBASIC20.87■□□□□ 0.93
RTL9Q8NET4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTL9Q8NET4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTL9Q8NET4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTL9Q8NET4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTL9Q8NET4 AL021920.2-201ENST00000624828 1351 ntBASIC20.87■□□□□ 0.93
RTL9Q8NET4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RTL9Q8NET4 LINC00895-201ENST00000629028 1637 ntBASIC20.87■□□□□ 0.93
RTL9Q8NET4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTL9Q8NET4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTL9Q8NET4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL9Q8NET4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL9Q8NET4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL9Q8NET4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL9Q8NET4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTL9Q8NET4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTL9Q8NET4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL9Q8NET4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL9Q8NET4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTL9Q8NET4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 LINC02012-201ENST00000608206 1725 ntBASIC20.86■□□□□ 0.93
RTL9Q8NET4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTL9Q8NET4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RTL9Q8NET4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms