Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 FRMD8P1-201ENST00000440433 1524 ntBASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 TUBB8P12-201ENST00000308911 1335 ntBASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 TUBB7P-202ENST00000428444 1305 ntBASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 TUBB8P7-204ENST00000567960 1332 ntBASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 MIR1199-201ENST00000621445 119 ntBASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRFBP1Q8NEF9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 AL021920.2-201ENST00000624828 1351 ntBASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 AP002414.1-201ENST00000391405 1147 ntBASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 RPS2P1-201ENST00000434010 821 ntBASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 AC018712.1-201ENST00000455767 687 ntBASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 AL160237.2-201ENST00000556165 472 ntBASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 AC008735.5-201ENST00000623544 497 ntBASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms