Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAM1L1Q8N609 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.83■□□□□ 0.29
TRAM1L1Q8N609 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAM1L1Q8N609 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAM1L1Q8N609 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 MIR940-201ENST00000401276 94 ntBASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 KRT18P2-201ENST00000447938 1258 ntBASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 POLD2P1-201ENST00000511220 997 ntBASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 AC005412.3-201ENST00000580309 715 ntBASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 ACTL9-202ENST00000612068 1252 ntBASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 AC010507.1-201ENST00000633895 436 ntBASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAM1L1Q8N609 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 RHOQP3-201ENST00000437982 621 ntBASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 AC091167.2-201ENST00000579581 588 ntBASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAM1L1Q8N609 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms