Protein–RNA interactions for Protein: Q8IV13

CCNJL, Cyclin-J-like protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNJLQ8IV13 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 AF238378.1-201ENST00000526806 358 ntBASIC17.54■□□□□ 0.4
CCNJLQ8IV13 AC009533.2-201ENST00000543664 586 ntBASIC17.54■□□□□ 0.4
CCNJLQ8IV13 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 AC114341.1-201ENST00000618070 349 ntBASIC17.54■□□□□ 0.4
CCNJLQ8IV13 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 AL353593.2-201ENST00000602529 1483 ntBASIC17.54■□□□□ 0.4
CCNJLQ8IV13 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNJLQ8IV13 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 AC068418.2-201ENST00000577309 3703 ntBASIC17.53■□□□□ 0.4
CCNJLQ8IV13 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 AC005336.2-201ENST00000593183 939 ntBASIC17.53■□□□□ 0.4
CCNJLQ8IV13 AC064862.7-201ENST00000604520 867 ntBASIC17.53■□□□□ 0.4
CCNJLQ8IV13 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCNJLQ8IV13 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 AGGF1P2-201ENST00000426656 2106 ntBASIC17.52■□□□□ 0.4
CCNJLQ8IV13 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 MIR5100-201ENST00000579544 119 ntBASIC17.52■□□□□ 0.4
CCNJLQ8IV13 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNJLQ8IV13 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCNJLQ8IV13 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.52■□□□□ 0.39
CCNJLQ8IV13 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCNJLQ8IV13 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCNJLQ8IV13 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms