Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 HLA-V-201ENST00000429037 534 ntBASIC18.13■□□□□ 0.49
RNF135Q8IUD6 DDX43P3-201ENST00000441064 443 ntBASIC18.13■□□□□ 0.49
RNF135Q8IUD6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 AC068137.2-201ENST00000605408 478 ntBASIC18.13■□□□□ 0.49
RNF135Q8IUD6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 FLJ13224-201ENST00000313737 1514 ntBASIC18.13■□□□□ 0.49
RNF135Q8IUD6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 TFAMP1-201ENST00000412727 736 ntBASIC18.12■□□□□ 0.49
RNF135Q8IUD6 AC055876.3-201ENST00000431496 288 ntBASIC18.12■□□□□ 0.49
RNF135Q8IUD6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 AC138649.4-201ENST00000612222 287 ntBASIC18.12■□□□□ 0.49
RNF135Q8IUD6 GGTLC5P-201ENST00000617623 998 ntBASIC18.12■□□□□ 0.49
RNF135Q8IUD6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF135Q8IUD6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 MIR661-201ENST00000384842 89 ntBASIC18.11■□□□□ 0.49
RNF135Q8IUD6 PTCHD3P3-201ENST00000403073 906 ntBASIC18.11■□□□□ 0.49
RNF135Q8IUD6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 AL353135.1-201ENST00000606729 504 ntBASIC18.11■□□□□ 0.49
RNF135Q8IUD6 AC009093.7-201ENST00000623853 1223 ntBASIC18.11■□□□□ 0.49
RNF135Q8IUD6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF135Q8IUD6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms