Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SCXQ7RTU7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SCXQ7RTU7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SCXQ7RTU7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC11.38□□□□□ -0.59
SCXQ7RTU7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SCXQ7RTU7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SCXQ7RTU7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SCXQ7RTU7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SCXQ7RTU7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SCXQ7RTU7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SCXQ7RTU7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SCXQ7RTU7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
SCXQ7RTU7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 IL9RP2-201ENST00000423948 1312 ntBASIC11.37□□□□□ -0.59
SCXQ7RTU7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 RBM17P3-201ENST00000417687 1192 ntBASIC11.37□□□□□ -0.59
SCXQ7RTU7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 RNA5SP419-201ENST00000515908 135 ntBASIC11.37□□□□□ -0.59
SCXQ7RTU7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 MTDHP3-201ENST00000594186 672 ntBASIC11.37□□□□□ -0.59
SCXQ7RTU7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 AL355877.3-201ENST00000622820 899 ntBASIC11.37□□□□□ -0.59
SCXQ7RTU7 AC148477.8-201ENST00000624298 468 ntBASIC11.37□□□□□ -0.59
SCXQ7RTU7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC11.37□□□□□ -0.59
SCXQ7RTU7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SCXQ7RTU7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 AC125634.1-201ENST00000438758 1403 ntBASIC11.36□□□□□ -0.59
SCXQ7RTU7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 AC022211.2-201ENST00000585075 2527 ntBASIC11.36□□□□□ -0.59
SCXQ7RTU7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 FGFR3P6-201ENST00000457012 610 ntBASIC11.36□□□□□ -0.59
SCXQ7RTU7 SCARNA2-201ENST00000458748 420 ntBASIC11.36□□□□□ -0.59
SCXQ7RTU7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms