Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 AL139384.1-201ENST00000612143 3047 ntBASIC20.23■□□□□ 0.83
CTR9Q6PD62 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CTR9Q6PD62 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.23■□□□□ 0.83
CTR9Q6PD62 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.23■□□□□ 0.83
CTR9Q6PD62 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
CTR9Q6PD62 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.23■□□□□ 0.83
CTR9Q6PD62 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 LINC02012-201ENST00000608206 1725 ntBASIC20.23■□□□□ 0.83
CTR9Q6PD62 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
CTR9Q6PD62 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTR9Q6PD62 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTR9Q6PD62 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTR9Q6PD62 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTR9Q6PD62 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTR9Q6PD62 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTR9Q6PD62 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 DNAJB3-201ENST00000446806 729 ntBASIC20.22■□□□□ 0.83
CTR9Q6PD62 AL513480.1-201ENST00000451731 511 ntBASIC20.22■□□□□ 0.83
CTR9Q6PD62 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 AC007064.4-201ENST00000637740 555 ntBASIC20.22■□□□□ 0.83
CTR9Q6PD62 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.22■□□□□ 0.83
CTR9Q6PD62 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTR9Q6PD62 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTR9Q6PD62 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 AC092053.1-201ENST00000605787 1936 ntBASIC20.21■□□□□ 0.83
CTR9Q6PD62 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTR9Q6PD62 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTR9Q6PD62 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTR9Q6PD62 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTR9Q6PD62 MIR1233-2-201ENST00000408138 82 ntBASIC20.21■□□□□ 0.83
CTR9Q6PD62 MIR1233-1-201ENST00000408722 82 ntBASIC20.21■□□□□ 0.83
CTR9Q6PD62 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTR9Q6PD62 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTR9Q6PD62 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTR9Q6PD62 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTR9Q6PD62 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CTR9Q6PD62 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTR9Q6PD62 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.2■□□□□ 0.82
CTR9Q6PD62 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms