Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 AC080038.1-201ENST00000611274 1154 ntBASIC12.94□□□□□ -0.34
MRPL54Q6P161 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL54Q6P161 ALOX12P2-203ENST00000570921 1945 ntBASIC12.94□□□□□ -0.34
MRPL54Q6P161 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MRPL54Q6P161 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 MYO15B-237ENST00000642007 4893 ntBASIC12.93□□□□□ -0.34
MRPL54Q6P161 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 AC239809.2-201ENST00000415381 517 ntBASIC12.93□□□□□ -0.34
MRPL54Q6P161 KSR1P1-201ENST00000446298 240 ntBASIC12.93□□□□□ -0.34
MRPL54Q6P161 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 AC026271.3-201ENST00000571884 352 ntBASIC12.93□□□□□ -0.34
MRPL54Q6P161 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 MIR4674-201ENST00000582457 87 ntBASIC12.93□□□□□ -0.34
MRPL54Q6P161 MTDHP1-201ENST00000605323 784 ntBASIC12.93□□□□□ -0.34
MRPL54Q6P161 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 AL139327.4-201ENST00000612362 153 ntBASIC12.93□□□□□ -0.34
MRPL54Q6P161 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 AL031985.4-201ENST00000642138 673 ntBASIC12.93□□□□□ -0.34
MRPL54Q6P161 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms