Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 IGHV3-22-201ENST00000520721 359 ntBASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 AL022342.1-201ENST00000400363 863 ntBASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 ELK2BP-201ENST00000415014 1224 ntBASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 AC098831.1-202ENST00000438821 336 ntBASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 AP002414.3-201ENST00000589352 1468 ntBASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 AC016396.2-201ENST00000562575 1417 ntBASIC17.81■□□□□ 0.44
TTC39BQ5VTQ0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 AL805961.1-202ENST00000641562 540 ntBASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC39BQ5VTQ0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 AC145285.3-201ENST00000564603 959 ntBASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 AC117500.6-201ENST00000624871 588 ntBASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 AC006504.4-201ENST00000592118 1568 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms