Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LGSNQ5TDP6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LGSNQ5TDP6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LGSNQ5TDP6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 AC117947.1-201ENST00000427448 529 ntBASIC17.25■□□□□ 0.35
LGSNQ5TDP6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 AC073912.3-201ENST00000624414 853 ntBASIC17.25■□□□□ 0.35
LGSNQ5TDP6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.25■□□□□ 0.35
LGSNQ5TDP6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 VENTXP5-201ENST00000523979 775 ntBASIC17.24■□□□□ 0.35
LGSNQ5TDP6 AC011840.4-201ENST00000578471 627 ntBASIC17.24■□□□□ 0.35
LGSNQ5TDP6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 AL138831.2-201ENST00000606564 490 ntBASIC17.24■□□□□ 0.35
LGSNQ5TDP6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 AC092171.3-201ENST00000610122 2651 ntBASIC17.24■□□□□ 0.35
LGSNQ5TDP6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 AC026691.1-201ENST00000602502 2017 ntBASIC17.24■□□□□ 0.35
LGSNQ5TDP6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 AL353593.2-201ENST00000602529 1483 ntBASIC17.24■□□□□ 0.35
LGSNQ5TDP6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LGSNQ5TDP6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 AC009336.1-201ENST00000608941 1553 ntBASIC17.23■□□□□ 0.35
LGSNQ5TDP6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms