Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 AL049840.3-201ENST00000602669 611 ntBASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 AL356488.2-201ENST00000602755 427 ntBASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 AC005593.1-201ENST00000624894 515 ntBASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.03■□□□□ 0.32
LDLRAP1Q5SW96 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 AC092910.1-201ENST00000482027 1129 ntBASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 AL805961.1-202ENST00000641562 540 ntBASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.02■□□□□ 0.32
LDLRAP1Q5SW96 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LDLRAP1Q5SW96 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
LDLRAP1Q5SW96 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
LDLRAP1Q5SW96 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
LDLRAP1Q5SW96 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.02■□□□□ 0.31
LDLRAP1Q5SW96 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LDLRAP1Q5SW96 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LDLRAP1Q5SW96 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LDLRAP1Q5SW96 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LDLRAP1Q5SW96 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 AP002414.3-201ENST00000589352 1468 ntBASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 AP002414.1-201ENST00000391405 1147 ntBASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 AC079776.4-201ENST00000511039 504 ntBASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 AC116407.3-201ENST00000623905 1129 ntBASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 AD000864.1-201ENST00000624076 2295 ntBASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LDLRAP1Q5SW96 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms