Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.55■□□□□ 0.72
USH1GQ495M9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
USH1GQ495M9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.55■□□□□ 0.72
USH1GQ495M9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.55■□□□□ 0.72
USH1GQ495M9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.55■□□□□ 0.72
USH1GQ495M9 AC079781.4-201ENST00000641908 219 ntBASIC19.55■□□□□ 0.72
USH1GQ495M9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
USH1GQ495M9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.55■□□□□ 0.72
USH1GQ495M9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.55■□□□□ 0.72
USH1GQ495M9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.55■□□□□ 0.72
USH1GQ495M9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.54■□□□□ 0.72
USH1GQ495M9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
USH1GQ495M9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.54■□□□□ 0.72
USH1GQ495M9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
USH1GQ495M9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.54■□□□□ 0.72
USH1GQ495M9 MKNK2P1-201ENST00000437526 628 ntBASIC19.54■□□□□ 0.72
USH1GQ495M9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.54■□□□□ 0.72
USH1GQ495M9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.54■□□□□ 0.72
USH1GQ495M9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.54■□□□□ 0.72
USH1GQ495M9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.54■□□□□ 0.72
USH1GQ495M9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
USH1GQ495M9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
USH1GQ495M9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USH1GQ495M9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USH1GQ495M9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
USH1GQ495M9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.53■□□□□ 0.72
USH1GQ495M9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USH1GQ495M9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
USH1GQ495M9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USH1GQ495M9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USH1GQ495M9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USH1GQ495M9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USH1GQ495M9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USH1GQ495M9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
USH1GQ495M9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USH1GQ495M9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.53■□□□□ 0.72
USH1GQ495M9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.53■□□□□ 0.72
USH1GQ495M9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
USH1GQ495M9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.53■□□□□ 0.72
USH1GQ495M9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
USH1GQ495M9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.53■□□□□ 0.72
USH1GQ495M9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.53■□□□□ 0.72
USH1GQ495M9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.53■□□□□ 0.72
USH1GQ495M9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.53■□□□□ 0.72
USH1GQ495M9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.53■□□□□ 0.72
USH1GQ495M9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USH1GQ495M9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
USH1GQ495M9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USH1GQ495M9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USH1GQ495M9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
USH1GQ495M9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
USH1GQ495M9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
USH1GQ495M9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USH1GQ495M9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
USH1GQ495M9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 FRMD8P1-201ENST00000440433 1524 ntBASIC19.52■□□□□ 0.72
USH1GQ495M9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms