Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 IGHV3-22-201ENST00000520721 359 ntBASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 AC009053.2-201ENST00000563701 2365 ntBASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.87■□□□□ 0.13
PRICKLE4Q2TBC4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 AC108073.2-201ENST00000464002 357 ntBASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 REXO1L3P-201ENST00000622202 1288 ntBASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 TOP3BP1-201ENST00000420768 1380 ntBASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.86■□□□□ 0.13
PRICKLE4Q2TBC4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 NKILA-202ENST00000614771 2598 ntBASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.85■□□□□ 0.13
PRICKLE4Q2TBC4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRICKLE4Q2TBC4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms