Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC092364.2-202ENST00000597012 1073 ntBASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 AKAP8P1-201ENST00000434743 1349 ntBASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 AL035633.1-201ENST00000406139 838 ntBASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 RBPMS2P1-201ENST00000437762 623 ntBASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 SPDYE14P-201ENST00000442619 822 ntBASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 FAM86GP-201ENST00000448322 971 ntBASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 AL138918.1-201ENST00000568306 659 ntBASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 MPDU1-223ENST00000582151 728 ntBASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 AL031055.1-201ENST00000606362 631 ntBASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 AL096865.1-201ENST00000606796 927 ntBASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SHROOM1Q2M3G4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 AC109635.5-201ENST00000533593 962 ntBASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 SLC25A39P2-201ENST00000537614 270 ntBASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 AC051619.7-201ENST00000568314 623 ntBASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 AC008677.1-201ENST00000519230 1561 ntBASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 AC016027.1-202ENST00000607927 1699 ntBASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SHROOM1Q2M3G4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SHROOM1Q2M3G4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SHROOM1Q2M3G4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SHROOM1Q2M3G4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SHROOM1Q2M3G4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SHROOM1Q2M3G4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SHROOM1Q2M3G4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.77■□□□□ 0.75
SHROOM1Q2M3G4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 AC016396.2-201ENST00000562575 1417 ntBASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 UXT-AS1-201ENST00000590504 1525 ntBASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms