Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.08□□□□□ -0.32
SNRPEP62304 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.08□□□□□ -0.32
SNRPEP62304 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SNRPEP62304 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.08□□□□□ -0.32
SNRPEP62304 ATP5G2P3-201ENST00000429083 425 ntBASIC13.08□□□□□ -0.32
SNRPEP62304 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.08□□□□□ -0.32
SNRPEP62304 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.08□□□□□ -0.32
SNRPEP62304 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.08□□□□□ -0.32
SNRPEP62304 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SNRPEP62304 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.08□□□□□ -0.32
SNRPEP62304 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.08□□□□□ -0.32
SNRPEP62304 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.08□□□□□ -0.32
SNRPEP62304 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SNRPEP62304 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SNRPEP62304 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.08□□□□□ -0.32
SNRPEP62304 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.07□□□□□ -0.32
SNRPEP62304 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 AL109954.1-202ENST00000564051 2148 ntBASIC13.07□□□□□ -0.32
SNRPEP62304 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SNRPEP62304 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SNRPEP62304 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.07□□□□□ -0.32
SNRPEP62304 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.07□□□□□ -0.32
SNRPEP62304 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.07□□□□□ -0.32
SNRPEP62304 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC13.07□□□□□ -0.32
SNRPEP62304 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.07□□□□□ -0.32
SNRPEP62304 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.07□□□□□ -0.32
SNRPEP62304 AL355001.2-201ENST00000620617 1191 ntBASIC13.07□□□□□ -0.32
SNRPEP62304 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
SNRPEP62304 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.07□□□□□ -0.32
SNRPEP62304 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.07□□□□□ -0.32
SNRPEP62304 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SNRPEP62304 AC027612.1-201ENST00000445234 2395 ntBASIC13.07□□□□□ -0.32
SNRPEP62304 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.07□□□□□ -0.32
SNRPEP62304 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.07□□□□□ -0.32
SNRPEP62304 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNRPEP62304 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SNRPEP62304 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.06□□□□□ -0.32
SNRPEP62304 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SNRPEP62304 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 SSR4P1-203ENST00000599569 2260 ntBASIC13.06□□□□□ -0.32
SNRPEP62304 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.06□□□□□ -0.32
SNRPEP62304 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.06□□□□□ -0.32
SNRPEP62304 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.06□□□□□ -0.32
SNRPEP62304 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.06□□□□□ -0.32
SNRPEP62304 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms