Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLDN6P56747 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLDN6P56747 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN6P56747 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN6P56747 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN6P56747 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLDN6P56747 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN6P56747 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CLDN6P56747 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLDN6P56747 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.36■□□□□ 0.21
CLDN6P56747 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN6P56747 SPDYE14P-201ENST00000442619 822 ntBASIC16.36■□□□□ 0.21
CLDN6P56747 RN7SL589P-201ENST00000481268 310 ntBASIC16.36■□□□□ 0.21
CLDN6P56747 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN6P56747 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLDN6P56747 AL512356.2-201ENST00000546955 174 ntBASIC16.36■□□□□ 0.21
CLDN6P56747 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN6P56747 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.36■□□□□ 0.21
CLDN6P56747 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.36■□□□□ 0.21
CLDN6P56747 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN6P56747 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLDN6P56747 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CLDN6P56747 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN6P56747 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN6P56747 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN6P56747 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN6P56747 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDN6P56747 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLDN6P56747 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN6P56747 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN6P56747 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN6P56747 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CLDN6P56747 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN6P56747 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.35■□□□□ 0.21
CLDN6P56747 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN6P56747 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN6P56747 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CLDN6P56747 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN6P56747 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN6P56747 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CLDN6P56747 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLDN6P56747 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CLDN6P56747 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN6P56747 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CLDN6P56747 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN6P56747 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLDN6P56747 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLDN6P56747 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN6P56747 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN6P56747 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN6P56747 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN6P56747 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
CLDN6P56747 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN6P56747 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN6P56747 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN6P56747 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN6P56747 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN6P56747 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CLDN6P56747 HMGA1P7-201ENST00000406908 502 ntBASIC16.34■□□□□ 0.21
CLDN6P56747 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.34■□□□□ 0.21
CLDN6P56747 MEIS3P1-201ENST00000495167 958 ntBASIC16.34■□□□□ 0.21
CLDN6P56747 IGHV3-62-201ENST00000520057 340 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms