Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
EPHB4P54760 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.21■□□□□ 0.67
EPHB4P54760 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
EPHB4P54760 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EPHB4P54760 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
EPHB4P54760 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHB4P54760 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHB4P54760 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
EPHB4P54760 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHB4P54760 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.2■□□□□ 0.66
EPHB4P54760 AC103564.2-201ENST00000432853 1299 ntBASIC19.2■□□□□ 0.66
EPHB4P54760 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 AC022145.2-201ENST00000598203 171 ntBASIC19.2■□□□□ 0.66
EPHB4P54760 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHB4P54760 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHB4P54760 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
EPHB4P54760 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 AL353593.2-201ENST00000602529 1483 ntBASIC19.2■□□□□ 0.66
EPHB4P54760 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.2■□□□□ 0.66
EPHB4P54760 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
EPHB4P54760 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHB4P54760 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHB4P54760 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHB4P54760 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHB4P54760 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
EPHB4P54760 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.19■□□□□ 0.66
EPHB4P54760 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHB4P54760 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHB4P54760 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHB4P54760 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHB4P54760 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHB4P54760 PP12613-201ENST00000424958 2230 ntBASIC19.19■□□□□ 0.66
EPHB4P54760 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHB4P54760 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.19■□□□□ 0.66
EPHB4P54760 DUX4L27-201ENST00000554796 1261 ntBASIC19.19■□□□□ 0.66
EPHB4P54760 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.19■□□□□ 0.66
EPHB4P54760 LINC00628-201ENST00000628516 1289 ntBASIC19.19■□□□□ 0.66
EPHB4P54760 AL805961.1-202ENST00000641562 540 ntBASIC19.19■□□□□ 0.66
EPHB4P54760 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.19■□□□□ 0.66
EPHB4P54760 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHB4P54760 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EPHB4P54760 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
EPHB4P54760 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.19■□□□□ 0.66
EPHB4P54760 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.19■□□□□ 0.66
EPHB4P54760 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
EPHB4P54760 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EPHB4P54760 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
EPHB4P54760 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
EPHB4P54760 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
EPHB4P54760 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.18■□□□□ 0.66
EPHB4P54760 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.18■□□□□ 0.66
EPHB4P54760 COX5BP2-201ENST00000392354 334 ntBASIC19.18■□□□□ 0.66
EPHB4P54760 PTCHD3P3-201ENST00000403073 906 ntBASIC19.18■□□□□ 0.66
EPHB4P54760 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.18■□□□□ 0.66
EPHB4P54760 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
EPHB4P54760 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.18■□□□□ 0.66
EPHB4P54760 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.18■□□□□ 0.66
EPHB4P54760 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.18■□□□□ 0.66
EPHB4P54760 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.18■□□□□ 0.66
EPHB4P54760 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.18■□□□□ 0.66
EPHB4P54760 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.18■□□□□ 0.66
EPHB4P54760 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.18■□□□□ 0.66
EPHB4P54760 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.18■□□□□ 0.66
EPHB4P54760 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.18■□□□□ 0.66
EPHB4P54760 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.18■□□□□ 0.66
EPHB4P54760 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.18■□□□□ 0.66
EPHB4P54760 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.18■□□□□ 0.66
EPHB4P54760 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EPHB4P54760 AL049757.1-201ENST00000616842 1596 ntBASIC19.18■□□□□ 0.66
EPHB4P54760 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.18■□□□□ 0.66
EPHB4P54760 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms