Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 AL020989.1-201ENST00000422979 469 ntBASIC16.61■□□□□ 0.25
KRT6CP48668 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
KRT6CP48668 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT6CP48668 AC012615.1-201ENST00000565797 1299 ntBASIC16.61■□□□□ 0.25
KRT6CP48668 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.61■□□□□ 0.25
KRT6CP48668 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT6CP48668 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
KRT6CP48668 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT6CP48668 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT6CP48668 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
KRT6CP48668 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT6CP48668 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT6CP48668 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
KRT6CP48668 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT6CP48668 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KRT6CP48668 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
KRT6CP48668 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
KRT6CP48668 AC018695.7-201ENST00000624587 2492 ntBASIC16.6■□□□□ 0.25
KRT6CP48668 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
KRT6CP48668 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
KRT6CP48668 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.6■□□□□ 0.25
KRT6CP48668 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT6CP48668 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
KRT6CP48668 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
KRT6CP48668 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT6CP48668 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 AL596257.1-201ENST00000641463 2694 ntBASIC16.6■□□□□ 0.25
KRT6CP48668 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
KRT6CP48668 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT6CP48668 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6CP48668 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
KRT6CP48668 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT6CP48668 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6CP48668 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KRT6CP48668 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6CP48668 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
KRT6CP48668 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.59■□□□□ 0.25
KRT6CP48668 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT6CP48668 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KRT6CP48668 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.59■□□□□ 0.25
KRT6CP48668 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT6CP48668 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT6CP48668 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT6CP48668 MIR3180-1-201ENST00000580374 94 ntBASIC16.59■□□□□ 0.25
KRT6CP48668 MIR3180-3-201ENST00000584616 94 ntBASIC16.59■□□□□ 0.25
KRT6CP48668 AC091076.1-201ENST00000610741 619 ntBASIC16.59■□□□□ 0.25
KRT6CP48668 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6CP48668 AP000867.4-201ENST00000641616 219 ntBASIC16.59■□□□□ 0.25
KRT6CP48668 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6CP48668 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6CP48668 AL118508.1-201ENST00000613502 2345 ntBASIC16.59■□□□□ 0.25
KRT6CP48668 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
KRT6CP48668 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
KRT6CP48668 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6CP48668 FRMD8P1-201ENST00000440433 1524 ntBASIC16.59■□□□□ 0.25
KRT6CP48668 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6CP48668 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
KRT6CP48668 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6CP48668 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6CP48668 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms