Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.23■□□□□ 0.51
SSR1P43307 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.23■□□□□ 0.51
SSR1P43307 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR1P43307 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SSR1P43307 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.22■□□□□ 0.51
SSR1P43307 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
SSR1P43307 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR1P43307 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR1P43307 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.22■□□□□ 0.51
SSR1P43307 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR1P43307 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.22■□□□□ 0.51
SSR1P43307 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SSR1P43307 ARMC10P1-201ENST00000313754 855 ntBASIC18.22■□□□□ 0.51
SSR1P43307 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.22■□□□□ 0.51
SSR1P43307 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.22■□□□□ 0.51
SSR1P43307 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSR1P43307 AP002383.4-201ENST00000442518 975 ntBASIC18.22■□□□□ 0.51
SSR1P43307 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.22■□□□□ 0.51
SSR1P43307 KRT17P6-201ENST00000453795 1220 ntBASIC18.22■□□□□ 0.51
SSR1P43307 AP000867.3-201ENST00000524675 377 ntBASIC18.22■□□□□ 0.51
SSR1P43307 TPSP2-201ENST00000561760 610 ntBASIC18.22■□□□□ 0.51
SSR1P43307 AC074051.2-201ENST00000565115 352 ntBASIC18.22■□□□□ 0.51
SSR1P43307 AL358472.4-201ENST00000633140 710 ntBASIC18.22■□□□□ 0.51
SSR1P43307 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR1P43307 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.22■□□□□ 0.51
SSR1P43307 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR1P43307 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.22■□□□□ 0.51
SSR1P43307 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.22■□□□□ 0.51
SSR1P43307 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.22■□□□□ 0.51
SSR1P43307 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR1P43307 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR1P43307 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR1P43307 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.22■□□□□ 0.51
SSR1P43307 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR1P43307 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR1P43307 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR1P43307 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SSR1P43307 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
SSR1P43307 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SSR1P43307 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
SSR1P43307 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.21■□□□□ 0.51
SSR1P43307 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.21■□□□□ 0.51
SSR1P43307 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
SSR1P43307 STK25P1-201ENST00000585406 838 ntBASIC18.21■□□□□ 0.51
SSR1P43307 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SSR1P43307 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.21■□□□□ 0.51
SSR1P43307 AP000550.4-202ENST00000639755 178 ntBASIC18.21■□□□□ 0.51
SSR1P43307 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 AC106886.4-201ENST00000623557 2502 ntBASIC18.21■□□□□ 0.51
SSR1P43307 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SSR1P43307 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SSR1P43307 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SSR1P43307 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SSR1P43307 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
SSR1P43307 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
SSR1P43307 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SSR1P43307 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.2■□□□□ 0.5
SSR1P43307 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 NSUN5P1-202ENST00000421140 1535 ntBASIC18.2■□□□□ 0.5
SSR1P43307 NSUN5P2-203ENST00000457352 1529 ntBASIC18.2■□□□□ 0.5
SSR1P43307 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 DRAXINP1-201ENST00000437611 948 ntBASIC18.2■□□□□ 0.5
SSR1P43307 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.2■□□□□ 0.5
SSR1P43307 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.2■□□□□ 0.5
SSR1P43307 KRT18P35-201ENST00000510488 1269 ntBASIC18.2■□□□□ 0.5
SSR1P43307 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.2■□□□□ 0.5
SSR1P43307 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.2■□□□□ 0.5
SSR1P43307 AC011467.2-201ENST00000598425 242 ntBASIC18.2■□□□□ 0.5
SSR1P43307 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.2■□□□□ 0.5
SSR1P43307 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SSR1P43307 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.2■□□□□ 0.5
SSR1P43307 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 LINC02012-201ENST00000608206 1725 ntBASIC18.2■□□□□ 0.5
SSR1P43307 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SSR1P43307 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms