Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.03■□□□□ 0.48
PCK1P35558 ACTG1P4-201ENST00000425123 1122 ntBASIC18.03■□□□□ 0.48
PCK1P35558 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.03■□□□□ 0.48
PCK1P35558 AC132008.2-207ENST00000454517 770 ntBASIC18.03■□□□□ 0.48
PCK1P35558 FOSL1P1-201ENST00000511041 816 ntBASIC18.03■□□□□ 0.48
PCK1P35558 AC106795.1-205ENST00000512851 1056 ntBASIC18.03■□□□□ 0.48
PCK1P35558 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.03■□□□□ 0.48
PCK1P35558 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCK1P35558 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
PCK1P35558 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCK1P35558 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
PCK1P35558 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCK1P35558 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCK1P35558 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCK1P35558 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCK1P35558 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 AC092053.1-201ENST00000605787 1936 ntBASIC18.02■□□□□ 0.48
PCK1P35558 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCK1P35558 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PCK1P35558 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PCK1P35558 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.02■□□□□ 0.48
PCK1P35558 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCK1P35558 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 AP001269.4-201ENST00000609611 512 ntBASIC18.02■□□□□ 0.48
PCK1P35558 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.02■□□□□ 0.48
PCK1P35558 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.02■□□□□ 0.48
PCK1P35558 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCK1P35558 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCK1P35558 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCK1P35558 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCK1P35558 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCK1P35558 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.02■□□□□ 0.47
PCK1P35558 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCK1P35558 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCK1P35558 AL162727.3-201ENST00000635661 2787 ntBASIC18.02■□□□□ 0.47
PCK1P35558 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCK1P35558 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCK1P35558 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PCK1P35558 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PCK1P35558 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCK1P35558 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.01■□□□□ 0.47
PCK1P35558 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCK1P35558 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.01■□□□□ 0.47
PCK1P35558 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.01■□□□□ 0.47
PCK1P35558 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.01■□□□□ 0.47
PCK1P35558 PRYP5-201ENST00000451909 266 ntBASIC18.01■□□□□ 0.47
PCK1P35558 AL121772.3-201ENST00000610840 674 ntBASIC18.01■□□□□ 0.47
PCK1P35558 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.01■□□□□ 0.47
PCK1P35558 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.01■□□□□ 0.47
PCK1P35558 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.01■□□□□ 0.47
PCK1P35558 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCK1P35558 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCK1P35558 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCK1P35558 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
PCK1P35558 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCK1P35558 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PCK1P35558 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms