Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RFC4P35249 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.26■□□□□ 0.99
RFC4P35249 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC21.26■□□□□ 0.99
RFC4P35249 ARSEP1-201ENST00000420443 635 ntBASIC21.26■□□□□ 0.99
RFC4P35249 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.26■□□□□ 0.99
RFC4P35249 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.26■□□□□ 0.99
RFC4P35249 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.26■□□□□ 0.99
RFC4P35249 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.26■□□□□ 0.99
RFC4P35249 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.26■□□□□ 0.99
RFC4P35249 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.26■□□□□ 0.99
RFC4P35249 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC4P35249 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC4P35249 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC4P35249 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC4P35249 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC4P35249 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC4P35249 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC4P35249 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RFC4P35249 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RFC4P35249 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RFC4P35249 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC4P35249 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC4P35249 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RFC4P35249 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC4P35249 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC4P35249 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC4P35249 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.25■□□□□ 0.99
RFC4P35249 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RFC4P35249 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC4P35249 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.25■□□□□ 0.99
RFC4P35249 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.25■□□□□ 0.99
RFC4P35249 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.25■□□□□ 0.99
RFC4P35249 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.25■□□□□ 0.99
RFC4P35249 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFC4P35249 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC4P35249 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.24■□□□□ 0.99
RFC4P35249 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.24■□□□□ 0.99
RFC4P35249 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.24■□□□□ 0.99
RFC4P35249 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
RFC4P35249 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RFC4P35249 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.24■□□□□ 0.99
RFC4P35249 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.24■□□□□ 0.99
RFC4P35249 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFC4P35249 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RFC4P35249 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.24■□□□□ 0.99
RFC4P35249 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.24■□□□□ 0.99
RFC4P35249 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC4P35249 TP53TG3HP-202ENST00000569755 579 ntBASIC21.24■□□□□ 0.99
RFC4P35249 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RFC4P35249 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.24■□□□□ 0.99
RFC4P35249 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.24■□□□□ 0.99
RFC4P35249 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC4P35249 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC4P35249 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RFC4P35249 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RFC4P35249 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC4P35249 AC020763.4-201ENST00000623414 4170 ntBASIC21.24■□□□□ 0.99
RFC4P35249 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC4P35249 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
RFC4P35249 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC4P35249 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.23■□□□□ 0.99
RFC4P35249 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.23■□□□□ 0.99
RFC4P35249 AC009477.1-201ENST00000452936 217 ntBASIC21.23■□□□□ 0.99
RFC4P35249 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.23■□□□□ 0.99
RFC4P35249 MPDU1-223ENST00000582151 728 ntBASIC21.23■□□□□ 0.99
RFC4P35249 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.23■□□□□ 0.99
RFC4P35249 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.23■□□□□ 0.99
RFC4P35249 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.23■□□□□ 0.99
RFC4P35249 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RFC4P35249 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
RFC4P35249 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC4P35249 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC4P35249 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms