Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA3P29320 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA3P29320 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.66■□□□□ 0.26
EPHA3P29320 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.66■□□□□ 0.26
EPHA3P29320 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA3P29320 AL596275.1-201ENST00000423464 877 ntBASIC16.66■□□□□ 0.26
EPHA3P29320 AC103564.2-201ENST00000432853 1299 ntBASIC16.66■□□□□ 0.26
EPHA3P29320 AL391256.1-201ENST00000443260 1855 ntBASIC16.66■□□□□ 0.26
EPHA3P29320 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHA3P29320 HYMAI.1-201ENST00000620949 238 ntBASIC16.66■□□□□ 0.26
EPHA3P29320 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA3P29320 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA3P29320 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
EPHA3P29320 ALOX12P2-203ENST00000570921 1945 ntBASIC16.66■□□□□ 0.26
EPHA3P29320 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA3P29320 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA3P29320 GPR89P-201ENST00000407924 1495 ntBASIC16.66■□□□□ 0.26
EPHA3P29320 AL513477.1-201ENST00000602865 2407 ntBASIC16.66■□□□□ 0.26
EPHA3P29320 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHA3P29320 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHA3P29320 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA3P29320 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHA3P29320 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA3P29320 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHA3P29320 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.65■□□□□ 0.26
EPHA3P29320 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHA3P29320 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
EPHA3P29320 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.65■□□□□ 0.26
EPHA3P29320 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.65■□□□□ 0.26
EPHA3P29320 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
EPHA3P29320 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
EPHA3P29320 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.65■□□□□ 0.26
EPHA3P29320 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.65■□□□□ 0.26
EPHA3P29320 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHA3P29320 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHA3P29320 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
EPHA3P29320 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.65■□□□□ 0.26
EPHA3P29320 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHA3P29320 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.65■□□□□ 0.26
EPHA3P29320 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
EPHA3P29320 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.65■□□□□ 0.26
EPHA3P29320 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA3P29320 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
EPHA3P29320 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
EPHA3P29320 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
EPHA3P29320 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
EPHA3P29320 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHA3P29320 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHA3P29320 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHA3P29320 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 AL138831.2-201ENST00000606564 490 ntBASIC16.64■□□□□ 0.25
EPHA3P29320 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHA3P29320 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHA3P29320 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHA3P29320 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
EPHA3P29320 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
EPHA3P29320 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 AC009336.1-201ENST00000608941 1553 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms