Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.02■□□□□ -0
RAB3BP20337 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB3BP20337 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB3BP20337 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3BP20337 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RAB3BP20337 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3BP20337 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3BP20337 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3BP20337 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.02□□□□□ -0.01
RAB3BP20337 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.02□□□□□ -0.01
RAB3BP20337 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3BP20337 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3BP20337 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3BP20337 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3BP20337 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RAB3BP20337 AL365203.3-201ENST00000609742 2057 ntBASIC15.02□□□□□ -0.01
RAB3BP20337 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3BP20337 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3BP20337 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3BP20337 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3BP20337 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RAB3BP20337 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RAB3BP20337 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB3BP20337 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RAB3BP20337 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB3BP20337 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 AC097374.2-201ENST00000618617 1306 ntBASIC15.01□□□□□ -0.01
RAB3BP20337 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB3BP20337 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB3BP20337 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB3BP20337 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
RAB3BP20337 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB3BP20337 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB3BP20337 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB3BP20337 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RAB3BP20337 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB3BP20337 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB3BP20337 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB3BP20337 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB3BP20337 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB3BP20337 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB3BP20337 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RAB3BP20337 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.01□□□□□ -0.01
RAB3BP20337 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB3BP20337 AL391256.1-201ENST00000443260 1855 ntBASIC15.01□□□□□ -0.01
RAB3BP20337 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB3BP20337 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB3BP20337 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB3BP20337 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3BP20337 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB3BP20337 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3BP20337 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15□□□□□ -0.01
RAB3BP20337 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15□□□□□ -0.01
RAB3BP20337 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3BP20337 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15□□□□□ -0.01
RAB3BP20337 AC024909.3-201ENST00000611513 2257 ntBASIC15□□□□□ -0.01
RAB3BP20337 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15□□□□□ -0.01
RAB3BP20337 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3BP20337 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3BP20337 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15□□□□□ -0.01
RAB3BP20337 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3BP20337 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3BP20337 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3BP20337 AC010460.3-201ENST00000511359 1579 ntBASIC15□□□□□ -0.01
RAB3BP20337 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3BP20337 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15□□□□□ -0.01
RAB3BP20337 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3BP20337 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15□□□□□ -0.01
RAB3BP20337 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3BP20337 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RAB3BP20337 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15□□□□□ -0.01
RAB3BP20337 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3BP20337 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3BP20337 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15□□□□□ -0.01
RAB3BP20337 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15□□□□□ -0.01
RAB3BP20337 AC109462.3-201ENST00000573934 613 ntBASIC15□□□□□ -0.01
RAB3BP20337 AL136038.4-201ENST00000603606 1261 ntBASIC15□□□□□ -0.01
RAB3BP20337 ITM2C-210ENST00000620962 501 ntBASIC15□□□□□ -0.01
RAB3BP20337 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RAB3BP20337 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms