Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRKCAP17252 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRKCAP17252 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRKCAP17252 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PRKCAP17252 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PRKCAP17252 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRKCAP17252 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.89■□□□□ 0.13
PRKCAP17252 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.89■□□□□ 0.13
PRKCAP17252 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
PRKCAP17252 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.89■□□□□ 0.13
PRKCAP17252 AC132938.5-201ENST00000624980 1813 ntBASIC15.89■□□□□ 0.13
PRKCAP17252 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRKCAP17252 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRKCAP17252 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRKCAP17252 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRKCAP17252 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PRKCAP17252 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
PRKCAP17252 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRKCAP17252 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PRKCAP17252 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 PMPCAP1-201ENST00000508114 1576 ntBASIC15.88■□□□□ 0.13
PRKCAP17252 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.88■□□□□ 0.13
PRKCAP17252 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.88■□□□□ 0.13
PRKCAP17252 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.88■□□□□ 0.13
PRKCAP17252 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.88■□□□□ 0.13
PRKCAP17252 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.88■□□□□ 0.13
PRKCAP17252 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.88■□□□□ 0.13
PRKCAP17252 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.88■□□□□ 0.13
PRKCAP17252 AC132008.2-207ENST00000454517 770 ntBASIC15.88■□□□□ 0.13
PRKCAP17252 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.88■□□□□ 0.13
PRKCAP17252 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.88■□□□□ 0.13
PRKCAP17252 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.88■□□□□ 0.13
PRKCAP17252 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.88■□□□□ 0.13
PRKCAP17252 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 AC073592.5-201ENST00000624854 528 ntBASIC15.88■□□□□ 0.13
PRKCAP17252 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.88■□□□□ 0.13
PRKCAP17252 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.88■□□□□ 0.13
PRKCAP17252 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 AL662844.4-201ENST00000606367 2838 ntBASIC15.88■□□□□ 0.13
PRKCAP17252 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.88■□□□□ 0.13
PRKCAP17252 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.88■□□□□ 0.13
PRKCAP17252 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.88■□□□□ 0.13
PRKCAP17252 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKCAP17252 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PRKCAP17252 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
PRKCAP17252 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.87■□□□□ 0.13
PRKCAP17252 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.87■□□□□ 0.13
PRKCAP17252 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.87■□□□□ 0.13
PRKCAP17252 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PRKCAP17252 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PRKCAP17252 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 AC003669.1-201ENST00000334569 611 ntBASIC15.87■□□□□ 0.13
PRKCAP17252 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.87■□□□□ 0.13
PRKCAP17252 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.87■□□□□ 0.13
PRKCAP17252 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.87■□□□□ 0.13
PRKCAP17252 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.87■□□□□ 0.13
PRKCAP17252 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.87■□□□□ 0.13
PRKCAP17252 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.87■□□□□ 0.13
PRKCAP17252 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PRKCAP17252 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PRKCAP17252 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.87■□□□□ 0.13
PRKCAP17252 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PRKCAP17252 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKCAP17252 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms