Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL3L1P16619 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.11□□□□□ -0.15
CCL3L1P16619 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CCL3L1P16619 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL3L1P16619 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL3L1P16619 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL3L1P16619 PI4KAP1-204ENST00000612579 1703 ntBASIC14.11□□□□□ -0.15
CCL3L1P16619 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.11□□□□□ -0.15
CCL3L1P16619 AC116407.3-201ENST00000623905 1129 ntBASIC14.11□□□□□ -0.15
CCL3L1P16619 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CCL3L1P16619 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.11□□□□□ -0.15
CCL3L1P16619 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL3L1P16619 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 FRMD8P1-201ENST00000440433 1524 ntBASIC14.1□□□□□ -0.15
CCL3L1P16619 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
CCL3L1P16619 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL3L1P16619 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCL3L1P16619 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.1□□□□□ -0.15
CCL3L1P16619 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CCL3L1P16619 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL3L1P16619 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.1□□□□□ -0.15
CCL3L1P16619 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL3L1P16619 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
CCL3L1P16619 AC098831.1-202ENST00000438821 336 ntBASIC14.1□□□□□ -0.15
CCL3L1P16619 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.1□□□□□ -0.15
CCL3L1P16619 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.1□□□□□ -0.15
CCL3L1P16619 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL3L1P16619 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL3L1P16619 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.1□□□□□ -0.15
CCL3L1P16619 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
CCL3L1P16619 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CCL3L1P16619 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL3L1P16619 AC117500.6-201ENST00000624871 588 ntBASIC14.1□□□□□ -0.15
CCL3L1P16619 AC005593.1-201ENST00000624894 515 ntBASIC14.1□□□□□ -0.15
CCL3L1P16619 AL805961.1-202ENST00000641562 540 ntBASIC14.1□□□□□ -0.15
CCL3L1P16619 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCL3L1P16619 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.1□□□□□ -0.15
CCL3L1P16619 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CCL3L1P16619 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL3L1P16619 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
CCL3L1P16619 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCL3L1P16619 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL3L1P16619 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL3L1P16619 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 AC022211.2-201ENST00000585075 2527 ntBASIC14.09□□□□□ -0.15
CCL3L1P16619 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CCL3L1P16619 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CCL3L1P16619 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCL3L1P16619 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.09□□□□□ -0.15
CCL3L1P16619 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL3L1P16619 CROCCP1-201ENST00000426910 5675 ntBASIC14.09□□□□□ -0.15
CCL3L1P16619 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL3L1P16619 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.09□□□□□ -0.15
CCL3L1P16619 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.09□□□□□ -0.15
CCL3L1P16619 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL3L1P16619 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.09□□□□□ -0.15
CCL3L1P16619 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.09□□□□□ -0.15
CCL3L1P16619 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.09□□□□□ -0.15
CCL3L1P16619 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.09□□□□□ -0.15
CCL3L1P16619 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.09□□□□□ -0.15
CCL3L1P16619 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.09□□□□□ -0.15
CCL3L1P16619 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.09□□□□□ -0.15
CCL3L1P16619 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL3L1P16619 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms