Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC130P13994 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CCDC130P13994 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC130P13994 AC018845.2-201ENST00000568326 409 ntBASIC18.07■□□□□ 0.48
CCDC130P13994 FAM197Y3-203ENST00000618346 717 ntBASIC18.07■□□□□ 0.48
CCDC130P13994 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC130P13994 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 AP001094.4-201ENST00000579008 2176 ntBASIC18.07■□□□□ 0.48
CCDC130P13994 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 AC060834.1-201ENST00000443027 2032 ntBASIC18.06■□□□□ 0.48
CCDC130P13994 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC130P13994 AC092068.3-201ENST00000587894 2016 ntBASIC18.06■□□□□ 0.48
CCDC130P13994 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC130P13994 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC130P13994 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC130P13994 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC130P13994 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC130P13994 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC130P13994 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.06■□□□□ 0.48
CCDC130P13994 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC130P13994 AL591424.1-201ENST00000442569 1213 ntBASIC18.06■□□□□ 0.48
CCDC130P13994 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC130P13994 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC130P13994 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC130P13994 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.06■□□□□ 0.48
CCDC130P13994 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC130P13994 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCDC130P13994 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC130P13994 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC130P13994 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC130P13994 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC130P13994 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CCDC130P13994 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC130P13994 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC130P13994 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC130P13994 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC130P13994 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC130P13994 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
CCDC130P13994 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC130P13994 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC130P13994 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC130P13994 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC130P13994 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC130P13994 RNA5SP416-201ENST00000516838 111 ntBASIC18.05■□□□□ 0.48
CCDC130P13994 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC130P13994 AC107918.2-201ENST00000530817 355 ntBASIC18.05■□□□□ 0.48
CCDC130P13994 DUX4L17-201ENST00000557360 1267 ntBASIC18.05■□□□□ 0.48
CCDC130P13994 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.05■□□□□ 0.48
CCDC130P13994 AC010507.1-201ENST00000633895 436 ntBASIC18.05■□□□□ 0.48
CCDC130P13994 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.05■□□□□ 0.48
CCDC130P13994 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CCDC130P13994 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC130P13994 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC130P13994 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC130P13994 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC130P13994 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC130P13994 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC130P13994 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CCDC130P13994 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC130P13994 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC130P13994 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC130P13994 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC130P13994 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC130P13994 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC130P13994 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC130P13994 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC130P13994 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CCDC130P13994 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC130P13994 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC130P13994 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
CCDC130P13994 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CCDC130P13994 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC130P13994 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC130P13994 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC130P13994 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CCDC130P13994 PGAM5P1-201ENST00000518923 814 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms