Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BMP3P12645 AC026120.1-201ENST00000611536 926 ntBASIC19.61■□□□□ 0.73
BMP3P12645 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP3P12645 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BMP3P12645 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
BMP3P12645 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
BMP3P12645 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BMP3P12645 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BMP3P12645 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP3P12645 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.61■□□□□ 0.73
BMP3P12645 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
BMP3P12645 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.61■□□□□ 0.73
BMP3P12645 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.6■□□□□ 0.73
BMP3P12645 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 KRT8P49-201ENST00000604166 1432 ntBASIC19.6■□□□□ 0.73
BMP3P12645 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
BMP3P12645 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
BMP3P12645 AL021920.2-201ENST00000624828 1351 ntBASIC19.6■□□□□ 0.73
BMP3P12645 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
BMP3P12645 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
BMP3P12645 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.6■□□□□ 0.73
BMP3P12645 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.6■□□□□ 0.73
BMP3P12645 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.6■□□□□ 0.73
BMP3P12645 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.6■□□□□ 0.73
BMP3P12645 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.6■□□□□ 0.73
BMP3P12645 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.6■□□□□ 0.73
BMP3P12645 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.6■□□□□ 0.73
BMP3P12645 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.6■□□□□ 0.73
BMP3P12645 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.6■□□□□ 0.73
BMP3P12645 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
BMP3P12645 AL009183.1-201ENST00000603760 355 ntBASIC19.6■□□□□ 0.73
BMP3P12645 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.6■□□□□ 0.73
BMP3P12645 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
BMP3P12645 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
BMP3P12645 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.6■□□□□ 0.73
BMP3P12645 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.6■□□□□ 0.73
BMP3P12645 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BMP3P12645 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
BMP3P12645 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.59■□□□□ 0.73
BMP3P12645 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.59■□□□□ 0.73
BMP3P12645 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.59■□□□□ 0.73
BMP3P12645 AC087641.1-201ENST00000557561 1021 ntBASIC19.59■□□□□ 0.73
BMP3P12645 MPDU1-223ENST00000582151 728 ntBASIC19.59■□□□□ 0.73
BMP3P12645 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.59■□□□□ 0.73
BMP3P12645 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
BMP3P12645 PP12613-201ENST00000424958 2230 ntBASIC19.59■□□□□ 0.73
BMP3P12645 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BMP3P12645 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
BMP3P12645 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.59■□□□□ 0.73
BMP3P12645 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BMP3P12645 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BMP3P12645 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
BMP3P12645 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.58■□□□□ 0.73
BMP3P12645 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BMP3P12645 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BMP3P12645 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
BMP3P12645 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
BMP3P12645 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.58■□□□□ 0.73
BMP3P12645 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BMP3P12645 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BMP3P12645 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BMP3P12645 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BMP3P12645 SPDYE11-202ENST00000450699 704 ntBASIC19.58■□□□□ 0.72
BMP3P12645 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.58■□□□□ 0.72
BMP3P12645 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.58■□□□□ 0.72
BMP3P12645 KRT8P48-201ENST00000515599 1220 ntBASIC19.58■□□□□ 0.72
BMP3P12645 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.58■□□□□ 0.72
BMP3P12645 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms