Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.1■□□□□ 0.33
SRFP11831 MIR6799-201ENST00000620297 69 ntBASIC17.1■□□□□ 0.33
SRFP11831 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFP11831 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SRFP11831 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFP11831 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.1■□□□□ 0.33
SRFP11831 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 LINC00895-201ENST00000629028 1637 ntBASIC17.1■□□□□ 0.33
SRFP11831 BCL2-203ENST00000589955 5011 ntBASIC17.1■□□□□ 0.33
SRFP11831 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFP11831 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SRFP11831 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFP11831 AC090164.3-201ENST00000610780 2143 ntBASIC17.09■□□□□ 0.33
SRFP11831 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SRFP11831 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SRFP11831 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.09■□□□□ 0.33
SRFP11831 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFP11831 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.09■□□□□ 0.33
SRFP11831 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.09■□□□□ 0.33
SRFP11831 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.09■□□□□ 0.33
SRFP11831 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFP11831 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.09■□□□□ 0.33
SRFP11831 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.09■□□□□ 0.33
SRFP11831 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.09■□□□□ 0.33
SRFP11831 PRYP6-201ENST00000514804 343 ntBASIC17.09■□□□□ 0.33
SRFP11831 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.09■□□□□ 0.33
SRFP11831 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.09■□□□□ 0.33
SRFP11831 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.09■□□□□ 0.33
SRFP11831 CYP2A7P1-201ENST00000595391 815 ntBASIC17.09■□□□□ 0.33
SRFP11831 AL589739.1-201ENST00000607720 493 ntBASIC17.09■□□□□ 0.33
SRFP11831 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFP11831 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRFP11831 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRFP11831 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRFP11831 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SRFP11831 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRFP11831 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.09■□□□□ 0.33
SRFP11831 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFP11831 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFP11831 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
SRFP11831 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFP11831 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFP11831 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.09■□□□□ 0.33
SRFP11831 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SRFP11831 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SRFP11831 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRFP11831 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRFP11831 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRFP11831 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
SRFP11831 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SRFP11831 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRFP11831 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.08■□□□□ 0.32
SRFP11831 AL391825.1-201ENST00000457671 1364 ntBASIC17.08■□□□□ 0.32
SRFP11831 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SRFP11831 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SRFP11831 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.08■□□□□ 0.32
SRFP11831 RPL37AP1-201ENST00000412502 279 ntBASIC17.08■□□□□ 0.32
SRFP11831 AP006294.1-201ENST00000415407 339 ntBASIC17.08■□□□□ 0.32
SRFP11831 DFFBP1-201ENST00000433250 979 ntBASIC17.08■□□□□ 0.32
SRFP11831 MTND6P24-201ENST00000440466 518 ntBASIC17.08■□□□□ 0.32
SRFP11831 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.08■□□□□ 0.32
SRFP11831 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.08■□□□□ 0.32
SRFP11831 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.08■□□□□ 0.32
SRFP11831 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SRFP11831 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.08■□□□□ 0.32
SRFP11831 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SRFP11831 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SRFP11831 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 LINC00896-202ENST00000609602 2128 ntBASIC17.08■□□□□ 0.32
SRFP11831 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SRFP11831 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SRFP11831 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRFP11831 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SRFP11831 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
SRFP11831 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRFP11831 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRFP11831 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRFP11831 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRFP11831 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.07■□□□□ 0.32
SRFP11831 FOXO1B-201ENST00000504678 1527 ntBASIC17.07■□□□□ 0.32
SRFP11831 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms