Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.19■□□□□ 0.02
ERCC1P07992 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.19■□□□□ 0.02
ERCC1P07992 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.19■□□□□ 0.02
ERCC1P07992 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.19■□□□□ 0.02
ERCC1P07992 RBM17P3-201ENST00000417687 1192 ntBASIC15.19■□□□□ 0.02
ERCC1P07992 AF186996.4-201ENST00000467186 377 ntBASIC15.19■□□□□ 0.02
ERCC1P07992 AC093909.1-201ENST00000504731 1122 ntBASIC15.19■□□□□ 0.02
ERCC1P07992 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.19■□□□□ 0.02
ERCC1P07992 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.19■□□□□ 0.02
ERCC1P07992 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.19■□□□□ 0.02
ERCC1P07992 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ERCC1P07992 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.19■□□□□ 0.02
ERCC1P07992 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.19■□□□□ 0.02
ERCC1P07992 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
ERCC1P07992 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
ERCC1P07992 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 AL139384.1-201ENST00000612143 3047 ntBASIC15.19■□□□□ 0.02
ERCC1P07992 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC1P07992 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ERCC1P07992 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ERCC1P07992 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ERCC1P07992 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ERCC1P07992 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.18■□□□□ 0.02
ERCC1P07992 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ERCC1P07992 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
ERCC1P07992 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.18■□□□□ 0.02
ERCC1P07992 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.18■□□□□ 0.02
ERCC1P07992 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.18■□□□□ 0.02
ERCC1P07992 AC002558.1-201ENST00000488906 803 ntBASIC15.18■□□□□ 0.02
ERCC1P07992 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.18■□□□□ 0.02
ERCC1P07992 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.18■□□□□ 0.02
ERCC1P07992 AC008608.2-201ENST00000606089 416 ntBASIC15.18■□□□□ 0.02
ERCC1P07992 AL138831.2-201ENST00000606564 490 ntBASIC15.18■□□□□ 0.02
ERCC1P07992 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.18■□□□□ 0.02
ERCC1P07992 AL139327.4-201ENST00000612362 153 ntBASIC15.18■□□□□ 0.02
ERCC1P07992 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.18■□□□□ 0.02
ERCC1P07992 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ERCC1P07992 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 AC116353.5-201ENST00000638148 1699 ntBASIC15.18■□□□□ 0.02
ERCC1P07992 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.18■□□□□ 0.02
ERCC1P07992 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
ERCC1P07992 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC1P07992 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
ERCC1P07992 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ERCC1P07992 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.17■□□□□ 0.02
ERCC1P07992 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.17■□□□□ 0.02
ERCC1P07992 AC125634.1-201ENST00000438758 1403 ntBASIC15.17■□□□□ 0.02
ERCC1P07992 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.17■□□□□ 0.02
ERCC1P07992 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.17■□□□□ 0.02
ERCC1P07992 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.17■□□□□ 0.02
ERCC1P07992 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ERCC1P07992 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.17■□□□□ 0.02
ERCC1P07992 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.17■□□□□ 0.02
ERCC1P07992 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.17■□□□□ 0.02
ERCC1P07992 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 RPS2P28-201ENST00000314255 741 ntBASIC15.17■□□□□ 0.02
ERCC1P07992 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms