Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RB1P06400 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.92■□□□□ 0.46
RB1P06400 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RB1P06400 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.92■□□□□ 0.46
RB1P06400 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RB1P06400 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RB1P06400 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.92■□□□□ 0.46
RB1P06400 AC142381.1-201ENST00000426099 345 ntBASIC17.92■□□□□ 0.46
RB1P06400 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.92■□□□□ 0.46
RB1P06400 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.92■□□□□ 0.46
RB1P06400 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.92■□□□□ 0.46
RB1P06400 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.92■□□□□ 0.46
RB1P06400 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RB1P06400 AL138918.1-201ENST00000568306 659 ntBASIC17.92■□□□□ 0.46
RB1P06400 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.92■□□□□ 0.46
RB1P06400 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.92■□□□□ 0.46
RB1P06400 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RB1P06400 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.92■□□□□ 0.46
RB1P06400 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.92■□□□□ 0.46
RB1P06400 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RB1P06400 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RB1P06400 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RB1P06400 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RB1P06400 AP3S2-216ENST00000617003 1561 ntBASIC17.91■□□□□ 0.46
RB1P06400 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
RB1P06400 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RB1P06400 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RB1P06400 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RB1P06400 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.91■□□□□ 0.46
RB1P06400 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
RB1P06400 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.91■□□□□ 0.46
RB1P06400 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.91■□□□□ 0.46
RB1P06400 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RB1P06400 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.91■□□□□ 0.46
RB1P06400 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.91■□□□□ 0.46
RB1P06400 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RB1P06400 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.91■□□□□ 0.46
RB1P06400 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RB1P06400 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.91■□□□□ 0.46
RB1P06400 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.91■□□□□ 0.46
RB1P06400 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.91■□□□□ 0.46
RB1P06400 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RB1P06400 AC073389.1-201ENST00000595595 795 ntBASIC17.91■□□□□ 0.46
RB1P06400 AC021097.1-201ENST00000607902 574 ntBASIC17.91■□□□□ 0.46
RB1P06400 AC003101.2-201ENST00000612557 442 ntBASIC17.91■□□□□ 0.46
RB1P06400 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
RB1P06400 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RB1P06400 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RB1P06400 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RB1P06400 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RB1P06400 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
RB1P06400 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RB1P06400 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RB1P06400 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.91■□□□□ 0.46
RB1P06400 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.9■□□□□ 0.46
RB1P06400 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.9■□□□□ 0.46
RB1P06400 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.9■□□□□ 0.46
RB1P06400 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
RB1P06400 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RB1P06400 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.9■□□□□ 0.46
RB1P06400 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
RB1P06400 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RB1P06400 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.9■□□□□ 0.46
RB1P06400 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RB1P06400 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RB1P06400 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RB1P06400 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.9■□□□□ 0.46
RB1P06400 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.9■□□□□ 0.46
RB1P06400 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 KRT17P7-201ENST00000451704 1104 ntBASIC17.9■□□□□ 0.46
RB1P06400 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.9■□□□□ 0.46
RB1P06400 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.9■□□□□ 0.46
RB1P06400 AL138828.2-201ENST00000615812 383 ntBASIC17.9■□□□□ 0.46
RB1P06400 SPDYE12P-201ENST00000618416 771 ntBASIC17.9■□□□□ 0.46
RB1P06400 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RB1P06400 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.9■□□□□ 0.46
RB1P06400 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.9■□□□□ 0.46
RB1P06400 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.9■□□□□ 0.46
RB1P06400 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RB1P06400 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.9■□□□□ 0.46
RB1P06400 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms