Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGN1P05114 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
HMGN1P05114 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGN1P05114 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGN1P05114 AC026691.1-201ENST00000602502 2017 ntBASIC15.51■□□□□ 0.07
HMGN1P05114 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGN1P05114 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGN1P05114 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
HMGN1P05114 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGN1P05114 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HMGN1P05114 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.51■□□□□ 0.07
HMGN1P05114 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
HMGN1P05114 AC011840.4-201ENST00000578471 627 ntBASIC15.51■□□□□ 0.07
HMGN1P05114 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.51■□□□□ 0.07
HMGN1P05114 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.51■□□□□ 0.07
HMGN1P05114 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGN1P05114 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGN1P05114 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGN1P05114 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGN1P05114 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGN1P05114 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGN1P05114 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGN1P05114 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGN1P05114 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGN1P05114 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
HMGN1P05114 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HMGN1P05114 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.5■□□□□ 0.07
HMGN1P05114 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 AC092171.3-201ENST00000610122 2651 ntBASIC15.5■□□□□ 0.07
HMGN1P05114 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 AC003669.1-201ENST00000334569 611 ntBASIC15.5■□□□□ 0.07
HMGN1P05114 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 AC092647.4-201ENST00000457211 535 ntBASIC15.5■□□□□ 0.07
HMGN1P05114 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.5■□□□□ 0.07
HMGN1P05114 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.5■□□□□ 0.07
HMGN1P05114 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.5■□□□□ 0.07
HMGN1P05114 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 AC124864.1-201ENST00000623408 392 ntBASIC15.5■□□□□ 0.07
HMGN1P05114 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGN1P05114 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGN1P05114 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGN1P05114 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGN1P05114 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGN1P05114 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGN1P05114 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms