Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTDNEP1O95476 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTDNEP1O95476 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTDNEP1O95476 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CTDNEP1O95476 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTDNEP1O95476 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
CTDNEP1O95476 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTDNEP1O95476 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTDNEP1O95476 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CTDNEP1O95476 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTDNEP1O95476 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTDNEP1O95476 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CTDNEP1O95476 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 AL021920.2-201ENST00000624828 1351 ntBASIC19.73■□□□□ 0.75
CTDNEP1O95476 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.73■□□□□ 0.75
CTDNEP1O95476 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.73■□□□□ 0.75
CTDNEP1O95476 OR7E14P-202ENST00000530490 1290 ntBASIC19.73■□□□□ 0.75
CTDNEP1O95476 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.73■□□□□ 0.75
CTDNEP1O95476 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.73■□□□□ 0.75
CTDNEP1O95476 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
CTDNEP1O95476 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CTDNEP1O95476 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTDNEP1O95476 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTDNEP1O95476 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTDNEP1O95476 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.73■□□□□ 0.75
CTDNEP1O95476 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CTDNEP1O95476 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTDNEP1O95476 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTDNEP1O95476 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTDNEP1O95476 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTDNEP1O95476 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTDNEP1O95476 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTDNEP1O95476 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTDNEP1O95476 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTDNEP1O95476 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTDNEP1O95476 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTDNEP1O95476 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 PI4KAP1-204ENST00000612579 1703 ntBASIC19.72■□□□□ 0.75
CTDNEP1O95476 AL031008.1-201ENST00000619963 541 ntBASIC19.72■□□□□ 0.75
CTDNEP1O95476 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTDNEP1O95476 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTDNEP1O95476 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTDNEP1O95476 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.72■□□□□ 0.75
CTDNEP1O95476 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTDNEP1O95476 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.71■□□□□ 0.75
CTDNEP1O95476 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTDNEP1O95476 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTDNEP1O95476 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CTDNEP1O95476 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CTDNEP1O95476 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.71■□□□□ 0.75
CTDNEP1O95476 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CTDNEP1O95476 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTDNEP1O95476 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTDNEP1O95476 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.71■□□□□ 0.75
CTDNEP1O95476 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CTDNEP1O95476 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTDNEP1O95476 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTDNEP1O95476 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTDNEP1O95476 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTDNEP1O95476 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.71■□□□□ 0.75
CTDNEP1O95476 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CTDNEP1O95476 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CTDNEP1O95476 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTDNEP1O95476 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.71■□□□□ 0.75
CTDNEP1O95476 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
CTDNEP1O95476 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.71■□□□□ 0.75
CTDNEP1O95476 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms