Protein–RNA interactions for Protein: O94907

DKK1, Dickkopf-related protein 1, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK1O94907 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.14■□□□□ 0.17
DKK1O94907 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.14■□□□□ 0.17
DKK1O94907 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.14■□□□□ 0.17
DKK1O94907 AC073389.1-201ENST00000595595 795 ntBASIC16.14■□□□□ 0.17
DKK1O94907 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
DKK1O94907 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DKK1O94907 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
DKK1O94907 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DKK1O94907 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DKK1O94907 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DKK1O94907 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DKK1O94907 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DKK1O94907 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DKK1O94907 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DKK1O94907 SLC22A20-204ENST00000530038 1673 ntBASIC16.14■□□□□ 0.17
DKK1O94907 AC016027.1-202ENST00000607927 1699 ntBASIC16.14■□□□□ 0.17
DKK1O94907 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DKK1O94907 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DKK1O94907 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DKK1O94907 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
DKK1O94907 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
DKK1O94907 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
DKK1O94907 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
DKK1O94907 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.13■□□□□ 0.17
DKK1O94907 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.13■□□□□ 0.17
DKK1O94907 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.13■□□□□ 0.17
DKK1O94907 API5-211ENST00000534695 560 ntTSL 5 BASIC16.13■□□□□ 0.17
DKK1O94907 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.13■□□□□ 0.17
DKK1O94907 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 AC009407.1-201ENST00000568958 598 ntBASIC16.13■□□□□ 0.17
DKK1O94907 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.13■□□□□ 0.17
DKK1O94907 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.13■□□□□ 0.17
DKK1O94907 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
DKK1O94907 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.13■□□□□ 0.17
DKK1O94907 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DKK1O94907 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.13■□□□□ 0.17
DKK1O94907 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DKK1O94907 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
DKK1O94907 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.12■□□□□ 0.17
DKK1O94907 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DKK1O94907 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.12■□□□□ 0.17
DKK1O94907 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.12■□□□□ 0.17
DKK1O94907 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.12■□□□□ 0.17
DKK1O94907 LINC00304-203ENST00000565008 1864 ntBASIC16.12■□□□□ 0.17
DKK1O94907 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
DKK1O94907 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
DKK1O94907 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DKK1O94907 AC098614.1-201ENST00000368528 745 ntBASIC16.12■□□□□ 0.17
DKK1O94907 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DKK1O94907 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.12■□□□□ 0.17
DKK1O94907 AL353779.1-201ENST00000434793 351 ntBASIC16.12■□□□□ 0.17
DKK1O94907 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DKK1O94907 AC017007.3-201ENST00000479865 435 ntBASIC16.12■□□□□ 0.17
DKK1O94907 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DKK1O94907 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DKK1O94907 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.12■□□□□ 0.17
DKK1O94907 IGHV3-71-201ENST00000523324 359 ntBASIC16.12■□□□□ 0.17
DKK1O94907 AC105233.2-201ENST00000523697 349 ntBASIC16.12■□□□□ 0.17
DKK1O94907 AF228730.5-201ENST00000530288 346 ntBASIC16.12■□□□□ 0.17
DKK1O94907 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.12■□□□□ 0.17
DKK1O94907 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.12■□□□□ 0.17
DKK1O94907 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DKK1O94907 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.12■□□□□ 0.17
DKK1O94907 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DKK1O94907 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.12■□□□□ 0.17
DKK1O94907 AP3S2-216ENST00000617003 1561 ntBASIC16.12■□□□□ 0.17
DKK1O94907 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
DKK1O94907 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DKK1O94907 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
DKK1O94907 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.12■□□□□ 0.17
DKK1O94907 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DKK1O94907 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DKK1O94907 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
DKK1O94907 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.11■□□□□ 0.17
DKK1O94907 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.11■□□□□ 0.17
DKK1O94907 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
DKK1O94907 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DKK1O94907 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
DKK1O94907 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
DKK1O94907 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DKK1O94907 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DKK1O94907 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DKK1O94907 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
DKK1O94907 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DKK1O94907 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.11■□□□□ 0.17
DKK1O94907 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.11■□□□□ 0.17
DKK1O94907 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DKK1O94907 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms